Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_808882 17 4312 NP_001137544 17 4312 XP_006720011 17 4312 XP_006720010 17 4312 NP_001005210 16 5631 NP_000055 16 7355 NP_078808 15 9605 NP_001020607 15 9605 NP_060264 15 9605 NP_690043 15 9605 NP_000780 15 9605 NP_001171528 15 9605 NP_001275915 15 9605 NP_001275914 15 9605 NP_009099 15 9605 NP_758519 15 9605 NP_000751 15 9605 NP_724781 15 9605 NP_940999 15 9605 XP_006721800 15 9605 XP_005257167 15 9605 XP_005256997 15 9605 XP_005256995 15 9605 XP_005251551 15 9605 XP_006716857 15 9605 XP_006712810 15 9605 XP_006712809 15 9605 XP_006712808 15 9605 XP_005270552 15 9605 XP_005270550 15 9605 XP_005270549 15 9605 NP_004913 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LATNFLLKM 9 LATNFLL+M Sbjct: 2557 LATNFLLEM 2565>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LATNFLLKM 9 LATNFLL+M Sbjct: 2557 LATNFLLEM 2565>NP_808882 Length = 309 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LATNFLLK 8 +ATNFLL+ Sbjct: 301 VATNFLLQ 308>NP_001137544 Length = 344 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LATNFLLK 8 +ATNFLL+ Sbjct: 336 VATNFLLQ 343>XP_006720011 Length = 231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LATNFLLK 8 +ATNFLL+ Sbjct: 223 VATNFLLQ 230>XP_006720010 Length = 262 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LATNFLLK 8 +ATNFLL+ Sbjct: 254 VATNFLLQ 261>NP_001005210 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNFLL Sbjct: 316 VATNFLL 322>NP_000055 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LATNFLLKM 9 L NFLL+M Sbjct: 471 LNVNFLLRM 479>NP_078808 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 115 NFLIKM 120>NP_001020607 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 115 NFLIKM 120>NP_060264 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NF+LKM Sbjct: 815 NFILKM 820>NP_690043 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 476 NFLMKM 481>NP_000780 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 1050 NFLMKM 1055>NP_001171528 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 476 NFLMKM 481>NP_001275915 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNF+L Sbjct: 399 VATNFML 405>NP_001275914 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNF+L Sbjct: 399 VATNFML 405>NP_009099 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNF+L Sbjct: 399 VATNFML 405>NP_758519 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 485 ATGFLLK 491>NP_000751 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 485 ATGFLLK 491>NP_724781 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 485 ATGFLLK 491>NP_940999 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LATNFLLK 8 + TNFL+K Sbjct: 357 VTTNFLVK 364>XP_006721800 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 360 NFLMKM 365>XP_005257167 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 867 NFLMKM 872>XP_005256997 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNF+L Sbjct: 338 VATNFML 344>XP_005256995 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LATNFLL 7 +ATNF+L Sbjct: 399 VATNFML 405>XP_005251551 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NF+LKM Sbjct: 815 NFILKM 820>XP_006716857 Length = 1834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NF+LKM Sbjct: 848 NFILKM 853>XP_006712810 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 115 NFLIKM 120>XP_006712809 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 115 NFLIKM 120>XP_006712808 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NFLLKM 9 NFL+KM Sbjct: 115 NFLIKM 120>XP_005270552 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 353 ATGFLLK 359>XP_005270550 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 485 ATGFLLK 491>XP_005270549 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ATNFLLK 8 AT FLLK Sbjct: 463 ATGFLLK 469>NP_004913 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LATNFLLK 8 + TNFL+K Sbjct: 357 VTTNFLVK 364Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.142 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,532 Number of extensions: 532 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |