Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 17 3301 XP_005273257 17 3301 NP_065796 16 5631 XP_005249302 16 5631 NP_001093250 16 7355 NP_115486 16 7355 NP_001007562 16 7355 NP_997254 16 7355 XP_005258573 16 7355 XP_005258572 16 7355 XP_005252508 16 7355 XP_006717511 16 7355 XP_005252507 16 7355 NP_001444 15 9605 NP_001028198 15 9605 NP_112175 15 9605 NP_001171532 15 9605 NP_001171533 15 9605 NP_116161 15 9605 NP_001264 15 9605 NP_001271159 15 9605 NP_149132 15 9605 NP_000529 15 9605 XP_005259736 15 9605 XP_005259735 15 9605 XP_005259734 15 9605 XP_005259733 15 9605 XP_005259732 15 9605 XP_005267740 15 9605 XP_006719025 15 9605 XP_005253725 15 9605 XP_006719024 15 9605 XP_006719023 15 9605 XP_006719022 15 9605 XP_006719021 15 9605 XP_005244894 15 9605 XP_005244893 15 9605 XP_005244892 15 9605 XP_005244890 15 9605 XP_006711187 15 9605 XP_006711186 15 9605 XP_006711185 15 9605 XP_006711184 15 9605 XP_006711183 15 9605>NP_064450 Length = 1722 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LASVAAAAK 9 LASVAA AK Sbjct: 459 LASVAAPAK 467>XP_005273257 Length = 1726 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LASVAAAAK 9 LASVAA AK Sbjct: 459 LASVAAPAK 467>NP_065796 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ASVAAAAK 9 ASVAAAA+ Sbjct: 3 ASVAAAAR 10>XP_005249302 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ASVAAAAK 9 ASVAAAA+ Sbjct: 3 ASVAAAAR 10>NP_001093250 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LASVAAAAK 9 L SVA+AAK Sbjct: 122 LPSVASAAK 130>NP_115486 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LASVAAAA 8 +ASVAAAA Sbjct: 29 VASVAAAA 36>NP_001007562 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LASVAAAA 8 LAS+AAAA Sbjct: 487 LASLAAAA 494>NP_997254 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASVAAAAK 9 LAS AAA K Sbjct: 487 LASAAAATK 495>XP_005258573 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LASVAAAA 8 LAS+AAAA Sbjct: 487 LASLAAAA 494>XP_005258572 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LASVAAAA 8 LAS+AAAA Sbjct: 487 LASLAAAA 494>XP_005252508 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASVAAAAK 9 LAS AAA K Sbjct: 487 LASAAAATK 495>XP_006717511 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASVAAAAK 9 LAS AAA K Sbjct: 487 LASAAAATK 495>XP_005252507 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASVAAAAK 9 LAS AAA K Sbjct: 487 LASAAAATK 495>NP_001444 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASVAAAA 8 LAS AAAA Sbjct: 485 LASAAAAA 492>NP_001028198 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 528 ASVAAAA 534>NP_112175 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 607 LASVAAA 613>NP_001171532 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 639 LASVAAA 645>NP_001171533 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 599 LASVAAA 605>NP_116161 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASVAAAA 8 LAS AAAA Sbjct: 561 LASAAAAA 568>NP_001264 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 224 ASVAAAA 230>NP_001271159 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASVAAAA 8 LAS AAAA Sbjct: 11 LASAAAAA 18>NP_149132 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASVAAAA 8 LAS AAAA Sbjct: 11 LASAAAAA 18>NP_000529 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 35 ASVAAAA 41>XP_005259736 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 348 ASVAAAA 354>XP_005259735 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 534 ASVAAAA 540>XP_005259734 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 552 ASVAAAA 558>XP_005259733 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 563 ASVAAAA 569>XP_005259732 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 569 ASVAAAA 575>XP_005267740 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LASVAAAA 8 LAS AAAA Sbjct: 11 LASAAAAA 18>XP_006719025 Length = 1902 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_005253725 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 217 ASVAAAA 223>XP_006719024 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 217 ASVAAAA 223>XP_006719023 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_006719022 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_006719021 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 ASVAAAA 8 ASVAAAA Sbjct: 224 ASVAAAA 230>XP_005244894 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 374 LASVAAA 380>XP_005244893 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 607 LASVAAA 613>XP_005244892 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 639 LASVAAA 645>XP_005244890 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 639 LASVAAA 645>XP_006711187 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 689 LASVAAA 695>XP_006711186 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 693 LASVAAA 699>XP_006711185 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 699 LASVAAA 705>XP_006711184 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 701 LASVAAA 707>XP_006711183 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LASVAAA 7 LASVAAA Sbjct: 733 LASVAAA 739Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.103 0.217 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 210,088 Number of extensions: 242 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |