Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_055904 17 3301 XP_006715095 17 3301 XP_006715094 17 3301 XP_006715093 17 3301 XP_006715092 17 3301 NP_277052 17 4312 NP_078969 16 5631 NP_001175 16 5631 NP_079521 16 5631 NP_001275740 16 5631 XP_006722975 16 5631 XP_006722974 16 5631 XP_006722973 16 5631 NP_060787 16 7355 XP_006726462 16 7355 XP_005276267 16 7355 XP_006725507 16 7355 XP_006724975 16 7355 XP_006724973 16 7355 XP_006714030 16 7355 XP_003960032 16 7355 XP_006710288 16 7355 XP_003960929 16 7355 XP_006710203 16 7355 NP_001278086 15 9605 NP_001181876 15 9605 NP_937887 15 9605 NP_937884 15 9605 NP_004944 15 9605 NP_001181875 15 9605 NP_937885 15 9605 NP_886553 15 9605 NP_859422 15 9605 NP_001154992 15 9605 NP_006339 15 9605 NP_061027 15 9605 NP_001137429 15 9605 NP_110411 15 9605 NP_001257822 15 9605 NP_001257821 15 9605 XP_006715633 15 9605 XP_006715632 15 9605 XP_005265088 15 9605 XP_005246128 15 9605 NP_001476 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LASLQRPVG 9 LASLQ+PVG Sbjct: 2881 LASLQQPVG 2889>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LASLQRPVG 9 LASLQ+PVG Sbjct: 2881 LASLQQPVG 2889>NP_055904 Length = 2517 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 1986 LASLQLPAG 1994>XP_006715095 Length = 2046 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 1515 LASLQLPAG 1523>XP_006715094 Length = 2407 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 1876 LASLQLPAG 1884>XP_006715093 Length = 2459 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 1928 LASLQLPAG 1936>XP_006715092 Length = 2490 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 1959 LASLQLPAG 1967>NP_277052 Length = 1731 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLQRPVG 9 SLQRP G Sbjct: 1202 SLQRPAG 1208>NP_078969 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LASLQRPV 8 +ASL RPV Sbjct: 240 IASLSRPV 247>NP_001175 Length = 2644 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LASLQRP 7 LASLQ+P Sbjct: 2303 LASLQKP 2309>NP_079521 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 329 LASLQPPPG 337>NP_001275740 Length = 141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LASLQRPV 8 L SLQRP+ Sbjct: 101 LGSLQRPL 108>XP_006722975 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 164 LASLQPPPG 172>XP_006722974 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 243 LASLQPPPG 251>XP_006722973 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 LASLQ P G Sbjct: 281 LASLQPPPG 289>NP_060787 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ASLQRP 7 ASLQRP Sbjct: 34 ASLQRP 39>XP_006726462 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 74 ALLQRPAG 81>XP_005276267 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 46 ALLQRPAG 53>XP_006725507 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 46 ALLQRPAG 53>XP_006724975 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 45 ALLQRPAG 52>XP_006724973 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 45 ALLQRPAG 52>XP_006714030 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ASLQRP 7 ASLQRP Sbjct: 3 ASLQRP 8>XP_003960032 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 46 ALLQRPAG 53>XP_006710288 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 42 ALLQRPAG 49>XP_003960929 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 46 ALLQRPAG 53>XP_006710203 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ASLQRPVG 9 A LQRP G Sbjct: 74 ALLQRPAG 81>NP_001278086 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 585 ASMQKPEG 592>NP_001181876 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 632 ASMQKPEG 639>NP_937887 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 538 ASMQKPEG 545>NP_937884 Length = 1599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 625 ASMQKPEG 632>NP_004944 Length = 1404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 429 ASMQKPEG 436>NP_001181875 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 632 ASMQKPEG 639>NP_937885 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 461 ASMQKPEG 468>NP_886553 Length = 1600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 AS+Q+P G Sbjct: 625 ASMQKPEG 632>NP_859422 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 ASL RP+G Sbjct: 687 ASLIRPLG 694>NP_001154992 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 ASL RP+G Sbjct: 708 ASLIRPLG 715>NP_006339 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLQRPVG 9 ASL RP+G Sbjct: 708 ASLIRPLG 715>NP_061027 Length = 4599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SLQRPVG 9 +LQRP G Sbjct: 4069 NLQRPTG 4075>NP_001137429 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASLQRP 7 L SLQRP Sbjct: 293 LMSLQRP 299>NP_110411 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASLQRP 7 L SLQRP Sbjct: 293 LMSLQRP 299>NP_001257822 Length = 113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQRPVG 9 +QRPVG Sbjct: 47 VQRPVG 52>NP_001257821 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LQRPVG 9 +QRPVG Sbjct: 61 VQRPVG 66>XP_006715633 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASLQRP 7 L SLQRP Sbjct: 293 LMSLQRP 299>XP_006715632 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LASLQRP 7 L SLQRP Sbjct: 293 LMSLQRP 299>XP_005265088 Length = 1694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LASLQRPVG 9 L SLQ P G Sbjct: 17 LGSLQLPAG 25>XP_005246128 Length = 222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 L +QRP+G Sbjct: 9 LMMMQRPLG 17>NP_001476 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LASLQRPVG 9 L +QRP+G Sbjct: 9 LMMMQRPLG 17Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.137 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 654,407 Number of extensions: 895 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |