Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001438 19 869 XP_006714824 19 869 NP_005179 18 1935 NP_001276090 17 3301 NP_001276089 17 3301 NP_005922 17 3301 XP_006726158 17 3301 XP_006726065 17 3301 NP_689549 17 4312 NP_000493 17 4312 XP_006722191 17 4312 NP_001180451 16 5631 NP_001180453 16 5631 NP_001180452 16 5631 NP_078795 16 5631 NP_001271286 16 5631 NP_057028 16 5631 NP_001185947 16 5631 NP_001185946 16 5631 NP_001139287 16 5631 NP_060161 16 5631 NP_057655 16 5631 XP_006721333 16 5631 XP_006721332 16 5631 XP_006713999 16 5631 XP_005246782 16 5631 XP_005246780 16 5631 XP_005246776 16 5631 XP_006712723 16 5631 XP_006712722 16 5631 XP_005246775 16 5631 NP_065983 16 7355 NP_002901 15 9605 NP_001159445 15 9605 NP_057311 15 9605 NP_001007526 15 9605 NP_001277284 15 9605 NP_001186623 15 9605 NP_001186622 15 9605 NP_001186621 15 9605 NP_001073341 15 9605 NP_003579 15 9605 NP_003031 15 9605 XP_006724848 15 9605 XP_006724847 15 9605 XP_005262538 15 9605 XP_005269501 15 9605 XP_006716157 15 9605>NP_001438 Length = 4349 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LARRTLSHI 9 LARRTL H+ Sbjct: 1008 LARRTLCHV 1016>XP_006714824 Length = 4349 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LARRTLSHI 9 LARRTL H+ Sbjct: 1008 LARRTLCHV 1016>NP_005179 Length = 906 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LARRTLSHI 9 LARRTLS I Sbjct: 785 LARRTLSDI 793>NP_001276090 Length = 340 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 RRTL+HI Sbjct: 97 RRTLTHI 103>NP_001276089 Length = 351 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 RRTL+HI Sbjct: 65 RRTLTHI 71>NP_005922 Length = 383 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 RRTL+HI Sbjct: 97 RRTLTHI 103>XP_006726158 Length = 351 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 RRTL+HI Sbjct: 65 RRTLTHI 71>XP_006726065 Length = 351 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 RRTL+HI Sbjct: 65 RRTLTHI 71>NP_689549 Length = 1066 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LARRTLSH 8 LAR+ LSH Sbjct: 61 LARKNLSH 68>NP_000493 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ARRTLSH 8 ARRTL H Sbjct: 444 ARRTLGH 450>XP_006722191 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ARRTLSH 8 ARRTL H Sbjct: 444 ARRTLGH 450>NP_001180451 Length = 1223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 450 RTLSHI 455>NP_001180453 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 460 RTLSHI 465>NP_001180452 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 466 RTLSHI 471>NP_078795 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 446 RTLSHI 451>NP_001271286 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARRTLSHI 9 LAR LSH+ Sbjct: 197 LARNFLSHV 205>NP_057028 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LARRTLSH 8 +ARR LSH Sbjct: 94 VARRILSH 101>NP_001185947 Length = 642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARRTLSHI 9 LAR LSH+ Sbjct: 163 LARNFLSHV 171>NP_001185946 Length = 691 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARRTLSHI 9 LAR LSH+ Sbjct: 212 LARNFLSHV 220>NP_001139287 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LARRTLSH 8 +ARR LSH Sbjct: 94 VARRILSH 101>NP_060161 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LARRTLSHI 9 LAR LSH+ Sbjct: 207 LARNFLSHV 215>NP_057655 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LARRTLSHI 9 +A+R LSH+ Sbjct: 187 IAKRQLSHL 195>XP_006721333 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 466 RTLSHI 471>XP_006721332 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTLSHI 9 RTLSHI Sbjct: 466 RTLSHI 471>XP_006713999 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARRTLSHI 9 ARR LSH+ Sbjct: 36 ARRGLSHL 43Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ARRTLSH 8 ARR LSH Sbjct: 209 ARRGLSH 215>XP_005246782 Length = 732 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 690 KRTLSHL 696>XP_005246780 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 916 KRTLSHL 922>XP_005246776 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 938 KRTLSHL 944>XP_006712723 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 938 KRTLSHL 944>XP_006712722 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 938 KRTLSHL 944>XP_005246775 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 +RTLSH+ Sbjct: 938 KRTLSHL 944>NP_065983 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ARRTLSHI 9 A RTL+H+ Sbjct: 790 AARTLNHV 797>NP_002901 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ARRTLSHI 9 ARR L H+ Sbjct: 221 ARRILQHV 228>NP_001159445 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 R+T+SH+ Sbjct: 311 RKTISHL 317>NP_057311 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LARRTLSHI 9 +A RT+ HI Sbjct: 155 IALRTIGHI 163>NP_001007526 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARRTLSHI 9 ARRTLS + Sbjct: 511 ARRTLSPV 518>NP_001277284 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARRTLSHI 9 ARRTLS + Sbjct: 376 ARRTLSPV 383>NP_001186623 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 RRTL+H Sbjct: 363 RRTLAH 368>NP_001186622 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 RRTL+H Sbjct: 368 RRTLAH 373>NP_001186621 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 RRTL+H Sbjct: 377 RRTLAH 382>NP_001073341 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 R+TLSH Sbjct: 843 RKTLSH 848>NP_003579 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 R+TLSH Sbjct: 861 RKTLSH 866>NP_003031 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 RRTL+H Sbjct: 377 RRTLAH 382>XP_006724848 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 R+TLSH Sbjct: 848 RKTLSH 853>XP_006724847 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 R+TLSH Sbjct: 850 RKTLSH 855>XP_005262538 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 R+TLSH Sbjct: 863 RKTLSH 868>XP_005269501 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRTLSHI 9 R+T+SH+ Sbjct: 532 RKTISHL 538>XP_006716157 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RRTLSH 8 RRTL+H Sbjct: 377 RRTLAH 382Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.137 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,823 Number of extensions: 735 Number of successful extensions: 49 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |