Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_115984 17 3301 NP_001273336 17 4312 NP_689473 17 4312 NP_000740 16 5631 NP_055429 16 5631 NP_660281 16 5631 XP_006712032 16 5631 XP_006710939 16 5631 XP_005271228 16 5631 XP_006710938 16 5631 XP_006710937 16 5631 NP_004817 16 7355 NP_001277716 16 7355 NP_061848 16 7355 NP_036553 16 7355 NP_006044 15 9605 NP_006010 15 9605 NP_001539 15 9605 NP_001257856 15 9605 NP_006693 15 9605 NP_001159583 15 9605 NP_001121613 15 9605 NP_001159585 15 9605 NP_001159586 15 9605 NP_001159584 15 9605 NP_001257859 15 9605 NP_001257857 15 9605 NP_001257858 15 9605 XP_005262372 15 9605 XP_005262371 15 9605 XP_006721223 15 9605 XP_005256343 15 9605 XP_005256342 15 9605 XP_006721222 15 9605 XP_006718480 15 9605 XP_005273766 15 9605 NP_004404 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LAQNEDAVK 9 +AQNEDAVK Sbjct: 395 VAQNEDAVK 403>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LAQNEDAVK 9 +AQNEDAVK Sbjct: 420 VAQNEDAVK 428>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LAQNEDAVK 9 +AQNEDAVK Sbjct: 395 VAQNEDAVK 403>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LAQNEDAVK 9 +AQNEDAVK Sbjct: 417 VAQNEDAVK 425>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LAQNEDAVK 9 +AQNEDAVK Sbjct: 420 VAQNEDAVK 428>NP_115984 Length = 817 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LAQNEDAV 8 LA+NEDA+ Sbjct: 650 LAENEDAL 657>NP_001273336 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAQNEDAV 8 LA+NED V Sbjct: 165 LAENEDVV 172>NP_689473 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAQNEDAV 8 LA+NED V Sbjct: 226 LAENEDVV 233>NP_000740 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAQNEDAV 8 +A+NEDA+ Sbjct: 25 IAENEDAL 32>NP_055429 Length = 1843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 1679 NEDAVK 1684>NP_660281 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 608 NEDAVK 613>XP_006712032 Length = 1001 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 837 NEDAVK 842>XP_006710939 Length = 989 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 554 NEDAVK 559>XP_005271228 Length = 1042 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 607 NEDAVK 612>XP_006710938 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 608 NEDAVK 613>XP_006710937 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDAVK Sbjct: 608 NEDAVK 613>NP_004817 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQNEDAVK 9 LAQ+ED+ K Sbjct: 277 LAQDEDSEK 285>NP_001277716 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQNEDAVK 9 LAQ+ED+ K Sbjct: 277 LAQDEDSEK 285>NP_061848 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAQNEDAVK 9 + +NE+AVK Sbjct: 243 IQENEEAVK 251>NP_036553 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NEDAVK 9 NEDA+K Sbjct: 264 NEDAIK 269>NP_006044 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQNEDAVK 9 LA+N AVK Sbjct: 206 LAENRPAVK 214>NP_006010 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQNEDAVK 9 LA+N AVK Sbjct: 422 LAENRPAVK 430>NP_001539 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QNE+A+K Sbjct: 67 QNEEALK 73>NP_001257856 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QNE+A+K Sbjct: 67 QNEEALK 73>NP_006693 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAQNEDA 7 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159583 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAQNEDA 7 LAQ EDA Sbjct: 842 LAQQEDA 848>NP_001121613 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 90 QNKDAVR 96>NP_001159585 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAQNEDA 7 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159586 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAQNEDA 7 LAQ EDA Sbjct: 832 LAQQEDA 838>NP_001159584 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAQNEDA 7 LAQ EDA Sbjct: 767 LAQQEDA 773>NP_001257859 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QNE+A+K Sbjct: 36 QNEEALK 42>NP_001257857 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QNE+A+K Sbjct: 36 QNEEALK 42>NP_001257858 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QNE+A+K Sbjct: 36 QNEEALK 42>XP_005262372 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAQNEDA 7 L+QNED+ Sbjct: 21 LSQNEDS 27>XP_005262371 Length = 1107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAQNEDA 7 L+QNED+ Sbjct: 101 LSQNEDS 107>XP_006721223 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 125 QNKDAVR 131>XP_005256343 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 90 QNKDAVR 96>XP_005256342 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 90 QNKDAVR 96>XP_006721222 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 125 QNKDAVR 131>XP_006718480 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQNEDAVK 9 LA+N AVK Sbjct: 422 LAENRPAVK 430>XP_005273766 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQNEDAVK 9 LA+N AVK Sbjct: 422 LAENRPAVK 430>NP_004404 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNEDAVK 9 QN+DAV+ Sbjct: 90 QNKDAVR 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.116 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,553 Number of extensions: 516 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |