Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1482 NP_000242 18 1482 XP_005264389 18 1482 NP_848509 17 4312 XP_006710459 17 4312 XP_005245803 17 4312 XP_005245802 17 4312 XP_006710602 15 9605 XP_006710601 15 9605 XP_006710598 15 9605 XP_006710597 15 9605 XP_006710596 15 9605 XP_006710595 15 9605 XP_006710594 15 9605 XP_006710593 15 9605 XP_006710592 15 9605 XP_006710591 15 9605 XP_006710590 15 9605 XP_006710589 15 9605 XP_006710588 15 9605 XP_006710586 15 9605 XP_006710585 15 9605 XP_005270755 15 9605 XP_006710584 15 9605 XP_005270754 15 9605 XP_005270753 15 9605 XP_006710583 15 9605 XP_005270752 15 9605 XP_006710582 15 9605 XP_005270751 15 9605 NP_037510 15 9605>NP_001245210 Length = 868 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAQLDAVAS 9 LAQLDAV S Sbjct: 533 LAQLDAVVS 541>NP_000242 Length = 934 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAQLDAVAS 9 LAQLDAV S Sbjct: 599 LAQLDAVVS 607>XP_005264389 Length = 921 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAQLDAVAS 9 LAQLDAV S Sbjct: 599 LAQLDAVVS 607>NP_848509 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LAQLDAVA 8 LAQL+AVA Sbjct: 287 LAQLEAVA 294>XP_006710459 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LAQLDAVA 8 LAQL+AVA Sbjct: 287 LAQLEAVA 294>XP_005245803 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LAQLDAVA 8 LAQL+AVA Sbjct: 287 LAQLEAVA 294>XP_005245802 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LAQLDAVA 8 LAQL+AVA Sbjct: 287 LAQLEAVA 294>XP_006710602 Length = 7391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3543 AQLDALA 3549>XP_006710601 Length = 4720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710598 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3533 AQLDALA 3539>XP_006710597 Length = 7451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3543 AQLDALA 3549>XP_006710596 Length = 7512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3492 AQLDALA 3498>XP_006710595 Length = 7526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3506 AQLDALA 3512>XP_006710594 Length = 7528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3508 AQLDALA 3514>XP_006710593 Length = 7539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3519 AQLDALA 3525>XP_006710592 Length = 7544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3524 AQLDALA 3530>XP_006710591 Length = 7558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3538 AQLDALA 3544>XP_006710590 Length = 7563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3543 AQLDALA 3549>XP_006710589 Length = 7595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3575 AQLDALA 3581>XP_006710588 Length = 7614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710586 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710585 Length = 7657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_005270755 Length = 7663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710584 Length = 7686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_005270754 Length = 7694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_005270753 Length = 7700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710583 Length = 7702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_005270752 Length = 7717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_006710582 Length = 7720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>XP_005270751 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQLDAVA 8 AQLDA+A Sbjct: 3703 AQLDALA 3709>NP_037510 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LAQLDAV 7 LAQLDA+ Sbjct: 22 LAQLDAL 28Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.119 0.273 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 272,645 Number of extensions: 220 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |