Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 NP_653080 20 509 XP_005267292 20 509 XP_005267291 20 509 XP_005267290 20 509 NP_001136157 17 2528 NP_055530 17 2528 XP_006719010 17 2528 XP_005271793 17 2528 NP_003298 16 5631 NP_835226 16 5631 NP_001268379 16 5631 NP_001268380 16 5631 XP_006724112 16 5631 XP_005261228 16 5631 NP_001104292 16 5631 NP_004876 16 7355 NP_001138228 16 7355 NP_444264 16 7355 NP_005700 15 9605 NP_710142 15 9605 NP_004924 15 9605 NP_055671 15 9605 NP_071926 15 9605 NP_003674 15 9605 NP_001170853 15 9605 NP_001170852 15 9605 NP_872291 15 9605 NP_001170854 15 9605 NP_001170855 15 9605 NP_872587 15 9605 XP_005252782 15 9605 XP_006718182 15 9605 XP_006714856 15 9605 XP_005268556 15 9605 XP_006714855 15 9605 XP_006714854 15 9605 XP_005268555 15 9605 XP_005268554 15 9605 XP_006711754 15 9605 XP_005245736 15 9605 XP_005245735 15 9605 XP_006711753 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 AQKSAEQP Sbjct: 865 AQKSAEQP 872>NP_653080 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 AQKSAEQP Sbjct: 767 AQKSAEQP 774>XP_005267292 Length = 1677 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 AQKSAEQP Sbjct: 760 AQKSAEQP 767>XP_005267291 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 AQKSAEQP Sbjct: 767 AQKSAEQP 774>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 AQKSAEQP Sbjct: 865 AQKSAEQP 872>NP_001136157 Length = 2087 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +Q+SAEQP Sbjct: 1311 SQRSAEQP 1318>NP_055530 Length = 1738 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +Q+SAEQP Sbjct: 962 SQRSAEQP 969>XP_006719010 Length = 1436 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +Q+SAEQP Sbjct: 660 SQRSAEQP 667>XP_005271793 Length = 2061 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +Q+SAEQP Sbjct: 1285 SQRSAEQP 1292>NP_003298 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +QK+AE+P Sbjct: 1214 SQKAAEEP 1221>NP_835226 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ A QP Sbjct: 321 LAQRRASQP 329>NP_001268379 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ A QP Sbjct: 320 LAQRRASQP 328>NP_001268380 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ A QP Sbjct: 321 LAQRRASQP 329>XP_006724112 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +QK+AE+P Sbjct: 1214 SQKAAEEP 1221>XP_005261228 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQKSAEQP 9 +QK+AE+P Sbjct: 1214 SQKAAEEP 1221>NP_001104292 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQKSAEQP 9 L+QKS E+P Sbjct: 349 LSQKSNEKP 357>NP_004876 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQKSAEQP 9 L +KSAE+P Sbjct: 496 LYRKSAEKP 504>NP_001138228 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQKSAEQP 9 L +KSAE+P Sbjct: 397 LYRKSAEKP 405>NP_444264 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAQKSAEQP 9 L +KSAE+P Sbjct: 394 LYRKSAEKP 402>NP_005700 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAQKSAEQ 8 +AQK+AE+ Sbjct: 345 IAQKAAEE 352>NP_710142 Length = 899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAQKSAEQ 8 +AQK+AE+ Sbjct: 345 IAQKAAEE 352>NP_004924 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAQKSAEQP 9 LAQ A QP Sbjct: 454 LAQDDASQP 462>NP_055671 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 +AQKSA P Sbjct: 752 MAQKSAAVP 760>NP_071926 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1441 SQKSLDQP 1448>NP_003674 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAQKSAEQP 9 L+QK +E+P Sbjct: 260 LSQKRSEKP 268>NP_001170853 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>NP_001170852 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>NP_872291 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>NP_001170854 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>NP_001170855 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>NP_872587 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 LAQ+ +QP Sbjct: 224 LAQRQQQQP 232>XP_005252782 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAQKSAEQ 8 +AQK+AE+ Sbjct: 326 IAQKAAEE 333>XP_006718182 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAQKSAEQ 8 +AQK+AE+ Sbjct: 326 IAQKAAEE 333>XP_006714856 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1243 SQKSLDQP 1250>XP_005268556 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1363 SQKSLDQP 1370>XP_006714855 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1370 SQKSLDQP 1377>XP_006714854 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1383 SQKSLDQP 1390>XP_005268555 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1421 SQKSLDQP 1428>XP_005268554 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQKSAEQP 9 +QKS +QP Sbjct: 1428 SQKSLDQP 1435>XP_006711754 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 +AQKSA P Sbjct: 420 MAQKSAAVP 428>XP_005245736 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 +AQKSA P Sbjct: 752 MAQKSAAVP 760>XP_005245735 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 +AQKSA P Sbjct: 763 MAQKSAAVP 771>XP_006711753 Length = 1521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAQKSAEQP 9 +AQKSA P Sbjct: 777 MAQKSAAVP 785Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.106 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,739 Number of extensions: 823 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |