Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001263627 18 1935 NP_001263628 18 1935 NP_001263626 18 1935 NP_064506 15 9605 NP_038464 15 9605 NP_995314 15 9605 NP_001186074 15 9605 NP_001186072 15 9605 NP_001073278 15 9605 XP_006712264 15 9605 XP_006712263 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001263627 Length = 182 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_001263628 Length = 187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_001263626 Length = 234 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 +AIYKQ+ Sbjct: 74 LAIYKQT 80>NP_038464 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1118 AVYKQS 1123>NP_995314 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1124 AVYKQS 1129>NP_001186074 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAMAIYKQS 9 LAMA+ KQ+ Sbjct: 554 LAMALKKQT 562>NP_001186072 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAMAIYKQS 9 LAMA+ KQ+ Sbjct: 809 LAMALKKQT 817>NP_001073278 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAMAIYKQS 9 LAMA+ KQ+ Sbjct: 776 LAMALKKQT 784>XP_006712264 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1116 AVYKQS 1121>XP_006712263 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1122 AVYKQS 1127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.124 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 296,996 Number of extensions: 197 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |