Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 19 665 XP_005268094 19 665 XP_006716440 17 4312 NP_444504 16 7355 XP_005267162 16 7355 XP_005267161 16 7355 XP_005267159 16 7355 XP_006710372 16 7355 XP_005270458 16 7355 XP_005270457 16 7355 NP_001036014 16 7355 NP_775789 15 9605 NP_001275675 15 9605 NP_065937 15 9605 XP_005267361 15 9605 XP_005271698 15 9605 XP_005271696 15 9605 XP_005271695 15 9605 XP_005271694 15 9605 XP_005271693 15 9605 XP_005271690 15 9605 XP_005271689 15 9605 XP_005271688 15 9605 XP_005271687 15 9605 XP_006717589 15 9605 XP_006717588 15 9605 XP_006717587 15 9605 XP_006717586 15 9605 XP_006717585 15 9605 XP_006717584 15 9605 XP_006716496 15 9605 XP_006716495 15 9605 XP_005251231 15 9605 XP_006716493 15 9605 XP_006716492 15 9605 XP_006716491 15 9605 XP_006716490 15 9605 NP_001129632 15 9605 NP_071387 15 9605 NP_001032365 15 9605 NP_612469 15 9605>NP_000360 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LALSYIVFV 9 LAL+YIVFV Sbjct: 578 LALAYIVFV 586>XP_005268094 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LALSYIVFV 9 LAL+YIVFV Sbjct: 578 LALAYIVFV 586>XP_006716440 Length = 171 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSYIVFV 9 A+SYI+F+ Sbjct: 156 AMSYIIFL 163>NP_444504 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSYIVFV 9 +L+Y+VFV Sbjct: 288 SLAYLVFV 295>XP_005267162 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALSYIVF 8 ALSY VF Sbjct: 380 ALSYFVF 386>XP_005267161 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALSYIVF 8 ALSY VF Sbjct: 380 ALSYFVF 386>XP_005267159 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALSYIVF 8 ALSY VF Sbjct: 572 ALSYFVF 578>XP_006710372 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSYIVFV 9 +L+Y+VFV Sbjct: 121 SLAYLVFV 128>XP_005270458 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSYIVFV 9 +L+Y+VFV Sbjct: 246 SLAYLVFV 253>XP_005270457 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALSYIVFV 9 +L+Y+VFV Sbjct: 288 SLAYLVFV 295>NP_001036014 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSYIVFV 9 LSY+VF+ Sbjct: 186 LSYMVFI 192>NP_775789 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 586 ALKYLVFL 593>NP_001275675 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LALSYIVFV 9 LAL+ I+F+ Sbjct: 42 LALTLIIFI 50>NP_065937 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 917 ALSYLVY 923>XP_005267361 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LALSYIVFV 9 LAL+ I+F+ Sbjct: 42 LALTLIIFI 50>XP_005271698 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 760 ALSYLVY 766>XP_005271696 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 885 ALSYLVY 891>XP_005271695 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 886 ALSYLVY 892>XP_005271694 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 918 ALSYLVY 924>XP_005271693 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 920 ALSYLVY 926>XP_005271690 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 958 ALSYLVY 964>XP_005271689 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 977 ALSYLVY 983>XP_005271688 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 979 ALSYLVY 985>XP_005271687 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALSYIVF 8 ALSY+V+ Sbjct: 980 ALSYLVY 986>XP_006717589 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006717588 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006717587 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006717586 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006717585 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006717584 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALSYIVFV 9 L +YIVFV Sbjct: 171 LECTYIVFV 179>XP_006716496 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 344 ALKYLVFL 351>XP_006716495 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 344 ALKYLVFL 351>XP_005251231 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 523 ALKYLVFL 530>XP_006716493 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 586 ALKYLVFL 593>XP_006716492 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 559 ALKYLVFL 566>XP_006716491 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 566 ALKYLVFL 573>XP_006716490 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 568 ALKYLVFL 575>NP_001129632 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALSYIVFV 9 AL Y+VF+ Sbjct: 586 ALKYLVFL 593>NP_071387 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSYIVFV 9 LS+IVF+ Sbjct: 579 LSFIVFI 585>NP_001032365 Length = 125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LALSYIVFV 9 LAL+ I+F+ Sbjct: 42 LALTLIIFI 50>NP_612469 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LALSYIVFV 9 LAL+ I+F+ Sbjct: 42 LALTLIIFI 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.157 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 357,750 Number of extensions: 437 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |