Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_001258934 16 5631 NP_055891 16 5631 NP_001243064 16 5631 NP_057323 16 5631 NP_839947 16 5631 NP_001307 16 5631 XP_005256732 16 5631 XP_005266930 16 5631 XP_006715465 16 5631 NP_653264 16 5631 NP_003259 16 7355 XP_006720661 16 7355 XP_006720660 16 7355 XP_006711570 16 7355 XP_006711569 16 7355 XP_006711568 16 7355 XP_005273300 16 7355 XP_006711567 16 7355 XP_006711566 16 7355 XP_005273298 16 7355 XP_005273299 16 7355 NP_001181927 15 9605 NP_055800 15 9605 NP_001080 15 9605 NP_003958 15 9605 NP_037496 15 9605 NP_001269464 15 9605 NP_569057 15 9605 NP_056328 15 9605 NP_001273387 15 9605 NP_071737 15 9605 NP_066022 15 9605 NP_003461 15 9605 NP_878905 15 9605 NP_001273386 15 9605 XP_006723369 15 9605 XP_006722421 15 9605 XP_006720500 15 9605 XP_005265446 15 9605 XP_005265445 15 9605 NP_001070883 15 9605 NP_001128350 15 9605 NP_542401 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 LALQQVFL Sbjct: 3028 LALQQVFL 3035>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 LALQQVFL Sbjct: 3020 LALQQVFL 3027>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 LALQQVFL Sbjct: 2981 LALQQVFL 2988>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 LALQQVFL Sbjct: 3060 LALQQVFL 3067>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 LALQQVFL Sbjct: 3073 LALQQVFL 3080>NP_001258934 Length = 578 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 LAL VFLG Sbjct: 76 LALNVVFLG 84>NP_055891 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 +ALQ+VFL Sbjct: 79 IALQKVFL 86>NP_001243064 Length = 915 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALQQVFLG 9 LALQ++F G Sbjct: 748 LALQEIFDG 756>NP_057323 Length = 3530 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALQQVFL 8 LALQQ F+ Sbjct: 2451 LALQQAFI 2458>NP_839947 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 LAL VFLG Sbjct: 94 LALNVVFLG 102>NP_001307 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALQQVFLG 9 LALQ++F G Sbjct: 804 LALQEIFDG 812>XP_005256732 Length = 3531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALQQVFL 8 LALQQ F+ Sbjct: 2452 LALQQAFI 2459>XP_005266930 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 +ALQ+VFL Sbjct: 79 IALQKVFL 86>XP_006715465 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 +ALQ+VFL Sbjct: 19 IALQKVFL 26>NP_653264 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 LAL QVF G Sbjct: 189 LALLQVFAG 197>NP_003259 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_006720661 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQQVFLG 9 +QQ+FLG Sbjct: 510 MQQLFLG 516>XP_006720660 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQQVFLG 9 +QQ+FLG Sbjct: 510 MQQLFLG 516>XP_006711570 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_006711569 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_006711568 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_005273300 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_006711567 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_006711566 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_005273298 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>XP_005273299 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALQQVFLG 9 +L+Q+FLG Sbjct: 474 SLEQLFLG 481>NP_001181927 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LQQVFLG 9 LQQ FLG Sbjct: 221 LQQQFLG 227>NP_055800 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LQQVFLG 9 LQQ FLG Sbjct: 221 LQQQFLG 227>NP_001080 Length = 1704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LALQQVFL 8 ++L+QVFL Sbjct: 1683 ISLEQVFL 1690>NP_003958 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 LAL +FLG Sbjct: 76 LALADMFLG 84>NP_037496 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 235 ALQQVF 240>NP_001269464 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 235 ALQQVF 240>NP_569057 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQQVFL 8 LQQVFL Sbjct: 244 LQQVFL 249>NP_056328 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 + LQQ+F G Sbjct: 364 VVLQQMFFG 372>NP_001273387 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LALQQVF 7 LALQ+VF Sbjct: 159 LALQRVF 165>NP_071737 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 119 ALQQVF 124>NP_066022 Length = 2564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LALQQVF 7 LALQ+VF Sbjct: 535 LALQKVF 541>NP_003461 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LALQQVF 7 LALQ+VF Sbjct: 258 LALQRVF 264>NP_878905 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 119 ALQQVF 124>NP_001273386 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LALQQVF 7 LALQ+VF Sbjct: 242 LALQRVF 248>XP_006723369 Length = 2394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LALQQVF 7 LALQ+VF Sbjct: 535 LALQKVF 541>XP_006722421 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LQQVFL 8 LQQVFL Sbjct: 244 LQQVFL 249>XP_006720500 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LQQVFLG 9 LQQ FLG Sbjct: 221 LQQQFLG 227>XP_005265446 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 152 ALQQVF 157>XP_005265445 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 152 ALQQVF 157>NP_001070883 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LALQQVFLG 9 + LQQ+F G Sbjct: 364 VVLQQMFFG 372>NP_001128350 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALQQVF 7 ALQQVF Sbjct: 119 ALQQVF 124>NP_542401 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALQQVFL 8 LALQ +FL Sbjct: 217 LALQNLFL 224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.152 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 379,145 Number of extensions: 543 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |