Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_001129246 17 4312 NP_003481 17 4312 NP_598344 17 4312 NP_001269633 16 5631 NP_001269634 16 5631 NP_001269635 16 5631 NP_005733 16 5631 NP_001269636 16 5631 XP_005246202 16 5631 XP_006711919 16 5631 NP_001026 16 7355 NP_065140 16 7355 NP_001243325 16 7355 NP_001243324 16 7355 NP_116231 16 7355 NP_112592 16 7355 XP_005269228 16 7355 XP_005250714 16 7355 XP_005250712 16 7355 XP_006711873 16 7355 XP_006711872 16 7355 XP_006711871 16 7355 XP_006711870 16 7355 XP_006711869 16 7355 XP_006711868 16 7355 XP_006711867 16 7355 XP_006711866 16 7355 XP_006711865 16 7355 NP_055178 15 9605 NP_001264984 15 9605 NP_640337 15 9605 NP_001121187 15 9605 NP_055851 15 9605 NP_001004754 15 9605 NP_004843 15 9605 NP_003578 15 9605 NP_055214 15 9605 NP_001157711 15 9605 XP_005266395 15 9605 XP_006715402 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALNSLYS 8 LALNSLYS Sbjct: 2540 LALNSLYS 2547>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LALNSLYS 8 LALNSLYS Sbjct: 2540 LALNSLYS 2547>NP_001129246 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALNSLYSL 9 A+NSLYS+ Sbjct: 190 AVNSLYSV 197>NP_003481 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALNSLYSL 9 A+NSLYS+ Sbjct: 191 AVNSLYSV 198>NP_598344 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALNSLYSL 9 A+NSLYS+ Sbjct: 191 AVNSLYSV 198>NP_001269633 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 67 LAVNGLYS 74>NP_001269634 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 63 LAVNGLYS 70>NP_001269635 Length = 445 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 20 LAVNGLYS 27>NP_005733 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 15 LAVNGLYS 22>NP_001269636 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 12 LAVNGLYS 19>XP_005246202 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 15 LAVNGLYS 22>XP_006711919 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LALNSLYS 8 LA+N LYS Sbjct: 15 LAVNGLYS 22>NP_001026 Length = 4967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>NP_065140 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN+ YSL Sbjct: 251 ALNTYYSL 258>NP_001243325 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN+ YSL Sbjct: 221 ALNTYYSL 228>NP_001243324 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN+ YSL Sbjct: 182 ALNTYYSL 189>NP_116231 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LALNSLYSL 9 LAL SL+SL Sbjct: 68 LALASLFSL 76>NP_112592 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALNSLYS 8 A+NS+YS Sbjct: 68 AINSIYS 74>XP_005269228 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALNSLYS 8 A+NS+YS Sbjct: 68 AINSIYS 74>XP_005250714 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LALNSLYSL 9 LAL SL+SL Sbjct: 68 LALASLFSL 76>XP_005250712 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LALNSLYSL 9 LAL SL+SL Sbjct: 67 LALASLFSL 75>XP_006711873 Length = 4954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711872 Length = 2735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711871 Length = 4906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711870 Length = 4965 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711869 Length = 4973 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711868 Length = 4975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711867 Length = 4977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711866 Length = 4984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>XP_006711865 Length = 4985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNSLYSL 9 LNSLY L Sbjct: 530 LNSLYEL 536>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN LYS+ Sbjct: 2758 ALNVLYSV 2765>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN LYS+ Sbjct: 2611 ALNVLYSV 2618>NP_640337 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALNSLYSL 9 LA+NS Y L Sbjct: 635 LAVNSSYGL 643>NP_001121187 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALNSLYSL 9 LA+NS Y L Sbjct: 635 LAVNSSYGL 643>NP_055851 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LALNSLYSL 9 LAL SL++L Sbjct: 7 LALGSLFAL 15>NP_001004754 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LALNSLYSL 9 +++NS+Y L Sbjct: 192 ISINSIYGL 200>NP_004843 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALNSLYS 8 A+N+LYS Sbjct: 206 AMNNLYS 212>NP_003578 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALNSLYSL 9 LAL LY+L Sbjct: 791 LALEQLYAL 799>NP_055214 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN LY+L Sbjct: 15 ALNLLYTL 22>NP_001157711 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALNSLYSL 9 LAL LY+L Sbjct: 731 LALEQLYAL 739>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALNSLYSL 9 ALN LYS+ Sbjct: 2767 ALNVLYSV 2774>XP_006715402 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LALNSLYSL 9 LA+NS Y L Sbjct: 635 LAVNSSYGL 643Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.133 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 445,846 Number of extensions: 574 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |