Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065114 17 2528 NP_001272378 17 3301 NP_001272376 17 3301 NP_001272374 17 3301 NP_001272373 17 3301 NP_055842 17 3301 NP_001272377 17 3301 NP_001272379 17 3301 XP_006726664 17 3301 XP_006726663 17 3301 XP_006726662 17 3301 XP_006726661 17 3301 XP_006726660 17 3301 XP_006726659 17 3301 XP_006726658 17 3301 XP_006725292 17 3301 XP_006725291 17 3301 XP_006725290 17 3301 XP_006725289 17 3301 XP_006725288 17 3301 XP_006725287 17 3301 XP_006725286 17 3301 XP_006720929 17 3301 XP_005255233 17 3301 XP_006720928 17 3301 XP_005255231 17 3301 XP_005255230 17 3301 NP_001035902 17 4312 NP_003887 17 4312 XP_005264687 17 4312 XP_006712190 17 4312 NP_001273707 16 5631 NP_113649 16 5631 NP_001273706 16 5631 XP_006716544 16 5631 NP_055429 16 7355 NP_001129673 15 9605 NP_694551 15 9605 NP_078986 15 9605 NP_077816 15 9605 NP_001026915 15 9605 NP_078905 15 9605 NP_001253982 15 9605 XP_005262047 15 9605 XP_005262046 15 9605 XP_005262045 15 9605 XP_005268318 15 9605 XP_005263275 15 9605>NP_065114 Length = 399 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LAKTCRAAV 9 LAK+C+AA+ Sbjct: 259 LAKSCQAAM 267>NP_001272378 Length = 498 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 146 LAKICRLAI 154>NP_001272376 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 131 LAKICRLAI 139>NP_001272374 Length = 760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 118 LAKICRLAI 126>NP_001272373 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 119 LAKICRLAI 127>NP_055842 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 146 LAKICRLAI 154>NP_001272377 Length = 697 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 55 LAKICRLAI 63>NP_001272379 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 146 LAKICRLAI 154>XP_006726664 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>XP_006726663 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 119 LAKICRLAI 127>XP_006726662 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 131 LAKICRLAI 139>XP_006726661 Length = 779 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 137 LAKICRLAI 145>XP_006726660 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 146 LAKICRLAI 154>XP_006726659 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 155 LAKICRLAI 163>XP_006726658 Length = 806 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>XP_006725292 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>XP_006725291 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 119 LAKICRLAI 127>XP_006725290 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 131 LAKICRLAI 139>XP_006725289 Length = 779 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 137 LAKICRLAI 145>XP_006725288 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 146 LAKICRLAI 154>XP_006725287 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 155 LAKICRLAI 163>XP_006725286 Length = 806 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>XP_006720929 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>XP_005255233 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 131 LAKICRLAI 139>XP_006720928 Length = 779 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 137 LAKICRLAI 145>XP_005255231 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 155 LAKICRLAI 163>XP_005255230 Length = 806 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR A+ Sbjct: 164 LAKICRLAI 172>NP_001035902 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AKTCRAAV 9 AKTCR V Sbjct: 166 AKTCRRCV 173>NP_003887 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AKTCRAAV 9 AKTCR V Sbjct: 189 AKTCRRCV 196>XP_005264687 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AKTCRAAV 9 AKTCR V Sbjct: 189 AKTCRRCV 196>XP_006712190 Length = 378 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AKTCRAAV 9 AKTCR V Sbjct: 149 AKTCRRCV 156>NP_001273707 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 L+ CRAAV Sbjct: 253 LSSICRAAV 261>NP_113649 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 L+ CRAAV Sbjct: 441 LSSICRAAV 449>NP_001273706 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 L+ CRAAV Sbjct: 255 LSSICRAAV 263>XP_006716544 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 L+ CRAAV Sbjct: 357 LSSICRAAV 365>NP_055429 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 +A CRAAV Sbjct: 627 VADMCRAAV 635>NP_001129673 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAKTC + V Sbjct: 80 LAKTCFSMV 88>NP_694551 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK+C+ V Sbjct: 196 LAKSCKVLV 204>NP_078986 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAKTC + V Sbjct: 80 LAKTCFSMV 88>NP_077816 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR+ + Sbjct: 994 LAKQCRSVL 1002>NP_001026915 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAKTCRAAV 9 L ++CRAA+ Sbjct: 202 LEESCRAAM 210>NP_078905 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AKTCRAAV 9 +K C+AA+ Sbjct: 271 SKVCKAAI 278>NP_001253982 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAKTCRAAV 9 L ++CRAA+ Sbjct: 87 LEESCRAAM 95>XP_005262047 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAKTCRAAV 9 L ++CRAA+ Sbjct: 87 LEESCRAAM 95>XP_005262046 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAKTCRAAV 9 L ++CRAA+ Sbjct: 132 LEESCRAAM 140>XP_005262045 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LAKTCRAAV 9 L ++CRAA+ Sbjct: 202 LEESCRAAM 210>XP_005268318 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKTCRAAV 9 LAK CR+ + Sbjct: 994 LAKQCRSVL 1002>XP_005263275 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AKTCRAAV 9 +K C+AA+ Sbjct: 242 SKVCKAAI 249Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.124 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 481,402 Number of extensions: 330 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |