Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001161328 17 2528 NP_060653 17 2528 XP_005253633 17 2528 XP_005253632 17 2528 XP_006719537 17 2528 XP_006719536 17 2528 XP_005253630 17 2528 XP_005253629 17 2528 NP_000069 16 5631 NP_001273014 16 5631 NP_653081 16 5631 NP_055650 16 5631 NP_001265578 16 5631 NP_001191351 16 5631 NP_001191347 16 5631 XP_005260682 16 5631 NP_001182682 16 7355 NP_079225 16 7355 NP_001182681 16 7355 XP_006714375 16 7355 XP_005263589 16 7355 NP_003325 15 9605 NP_695012 15 9605 NP_001035810 15 9605 NP_000393 15 9605 NP_001269340 15 9605 NP_002703 15 9605 NP_001269338 15 9605 NP_001269343 15 9605 NP_001269339 15 9605 NP_001269342 15 9605 NP_008937 15 9605 NP_001269341 15 9605 NP_898898 15 9605 NP_001231681 15 9605 XP_005274715 15 9605 XP_005274714 15 9605 XP_005272707 15 9605 XP_005272706 15 9605 XP_005272705 15 9605 XP_006716835 15 9605 XP_006716834 15 9605 XP_006716833 15 9605 XP_006716832 15 9605 XP_006716812 15 9605 XP_005262777 15 9605 XP_005262774 15 9605 NP_671728 15 9605 YP_003024035 15 9605>NP_001161328 Length = 1393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1227 KKKLFLV 1233>NP_060653 Length = 1392 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1226 KKKLFLV 1232>XP_005253633 Length = 1392 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1226 KKKLFLV 1232>XP_005253632 Length = 1392 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1226 KKKLFLV 1232>XP_006719537 Length = 1393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1227 KKKLFLV 1233>XP_006719536 Length = 1393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1227 KKKLFLV 1233>XP_005253630 Length = 1393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1227 KKKLFLV 1233>XP_005253629 Length = 1393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLFLV Sbjct: 1227 KKKLFLV 1233>NP_000069 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKKKLFL 8 +KKKLFL Sbjct: 393 SKKKLFL 399>NP_001273014 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKKKLFL 8 +KKKLFL Sbjct: 333 SKKKLFL 339>NP_653081 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLF++ Sbjct: 292 KKKLFMI 298>NP_055650 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLF++ Sbjct: 280 KKKLFMI 286>NP_001265578 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLF++ Sbjct: 200 KKKLFMI 206>NP_001191351 Length = 430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKKL+ Sbjct: 415 LAKKKLY 421>NP_001191347 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKKL+ Sbjct: 452 LAKKKLY 458>XP_005260682 Length = 267 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KKKLFLV 9 KKKLF++ Sbjct: 79 KKKLFMI 85>NP_001182682 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KKKLFL 8 KKKLFL Sbjct: 189 KKKLFL 194>NP_079225 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAKKKLFL 8 LAKK LF+ Sbjct: 1027 LAKKSLFV 1034>NP_001182681 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KKKLFL 8 KKKLFL Sbjct: 188 KKKLFL 193>XP_006714375 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAKKKLFL 8 LAKK LF+ Sbjct: 1043 LAKKSLFV 1050>XP_005263589 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KKKLFL 8 KKKLFL Sbjct: 188 KKKLFL 193>NP_003325 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKKKLFLV 9 L K+K FLV Sbjct: 466 LGKQKYFLV 474>NP_695012 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKKKLFLV 9 L K+K FLV Sbjct: 466 LGKQKYFLV 474>NP_001035810 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKK++ Sbjct: 43 LAKKKIY 49>NP_000393 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKK++ Sbjct: 73 LAKKKIY 79>NP_001269340 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 124 KKLFLV 129>NP_002703 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 167 KKLFLV 172>NP_001269338 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 124 KKLFLV 129>NP_001269343 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 108 KKLFLV 113>NP_001269339 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 167 KKLFLV 172>NP_001269342 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 108 KKLFLV 113>NP_008937 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 172 KKLFLV 177>NP_001269341 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKLFLV 9 KKLFLV Sbjct: 151 KKLFLV 156>NP_898898 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKKLFLV 9 LAK +LFL+ Sbjct: 495 LAKMELFLM 503>NP_001231681 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 666 SKKKLFQV 673>XP_005274715 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKK++ Sbjct: 43 LAKKKIY 49>XP_005274714 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LAKKKLF 7 LAKKK++ Sbjct: 73 LAKKKIY 79>XP_005272707 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKKKLFLV 9 L K+K FLV Sbjct: 466 LGKQKYFLV 474>XP_005272706 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKKKLFLV 9 L K+K FLV Sbjct: 472 LGKQKYFLV 480>XP_005272705 Length = 1109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKKKLFLV 9 L K+K FLV Sbjct: 517 LGKQKYFLV 525>XP_006716835 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 639 SKKKLFQV 646>XP_006716834 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 667 SKKKLFQV 674>XP_006716833 Length = 1083 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 685 SKKKLFQV 692>XP_006716832 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 685 SKKKLFQV 692>XP_006716812 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 676 SKKKLFQV 683>XP_005262777 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKKLFLV 9 LAK +LFL+ Sbjct: 283 LAKMELFLM 291>XP_005262774 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKKLFLV 9 LAK +LFL+ Sbjct: 513 LAKMELFLM 521>NP_671728 Length = 992 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKKKLFLV 9 +KKKLF V Sbjct: 658 SKKKLFQV 665>YP_003024035 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LAKKKLFL 8 L++KKL+L Sbjct: 89 LSRKKLYL 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.150 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 502,124 Number of extensions: 588 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |