Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 509 NP_000242 20 509 XP_005264389 20 509 NP_937878 18 1482 NP_937875 18 1482 NP_002924 18 1482 NP_937877 18 1482 NP_000013 17 2528 XP_005260293 17 2528 XP_006723742 17 2528 NP_003744 17 4312 NP_002187 17 4312 NP_003649 17 4312 NP_001138608 16 7355 NP_689451 16 7355 NP_001138606 16 7355 NP_001138607 16 7355 NP_001138609 16 7355 NP_689452 16 7355 NP_004368 16 7355 NP_001264282 16 7355 NP_060959 16 7355 NP_919420 16 7355 NP_001180247 16 7355 NP_001124506 16 7355 XP_006714171 16 7355 XP_005272332 16 7355 XP_006713941 16 7355 XP_006713940 16 7355 XP_005272331 16 7355 XP_005245393 16 7355 XP_006711515 16 7355 XP_006711514 16 7355 XP_006711513 16 7355 NP_003375 15 9605 NP_008860 15 9605 XP_006725560 15 9605 XP_005268098 15 9605 XP_006720310 15 9605 XP_006715231 15 9605>NP_001245210 Length = 868 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LAKKFQRQ 8 LAKKFQRQ Sbjct: 324 LAKKFQRQ 331>NP_000242 Length = 934 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LAKKFQRQ 8 LAKKFQRQ Sbjct: 390 LAKKFQRQ 397>XP_005264389 Length = 921 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LAKKFQRQ 8 LAKKFQRQ Sbjct: 390 LAKKFQRQ 397>NP_937878 Length = 156 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AKKFQRQ 8 AKKFQRQ Sbjct: 33 AKKFQRQ 39>NP_937875 Length = 156 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AKKFQRQ 8 AKKFQRQ Sbjct: 33 AKKFQRQ 39>NP_002924 Length = 156 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AKKFQRQ 8 AKKFQRQ Sbjct: 33 AKKFQRQ 39>NP_937877 Length = 156 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AKKFQRQ 8 AKKFQRQ Sbjct: 33 AKKFQRQ 39>NP_000013 Length = 363 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 L KK+Q+QT Sbjct: 168 LCKKYQQQT 176>XP_005260293 Length = 339 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 L KK+Q+QT Sbjct: 168 LCKKYQQQT 176>XP_006723742 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 L KK+Q+QT Sbjct: 168 LCKKYQQQT 176>NP_003744 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAKKFQRQ 8 L KKFQ+Q Sbjct: 136 LQKKFQKQ 143>NP_002187 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKKFQRQ 8 AKKF+RQ Sbjct: 373 AKKFRRQ 379>NP_003649 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAKKFQRQ 8 L KKFQ+Q Sbjct: 148 LEKKFQKQ 155>NP_001138608 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_689451 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_001138606 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 173 LAKEFQDKT 181>NP_001138607 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_001138609 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_689452 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_004368 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LAKKFQRQT 9 LAK+FQ +T Sbjct: 207 LAKEFQDKT 215>NP_001264282 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAKKFQRQ 8 + KKF+RQ Sbjct: 188 ITKKFKRQ 195>NP_060959 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AKKFQRQ 8 AKK QRQ Sbjct: 1832 AKKLQRQ 1838>NP_919420 Length = 232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 72 LCKKYSRET 80>NP_001180247 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 72 LCKKYSRET 80>NP_001124506 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 72 LCKKYSRET 80>XP_006714171 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LAKKFQRQ 8 + KKF+RQ Sbjct: 30 ITKKFKRQ 37>XP_005272332 Length = 192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 72 LCKKYSRET 80>XP_006713941 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 6 LCKKYSRET 14>XP_006713940 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 28 LCKKYSRET 36>XP_005272331 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LAKKFQRQT 9 L KK+ R+T Sbjct: 72 LCKKYSRET 80>XP_005245393 Length = 2663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AKKFQRQ 8 AKK QRQ Sbjct: 1832 AKKLQRQ 1838>XP_006711515 Length = 2904 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AKKFQRQ 8 AKK QRQ Sbjct: 1832 AKKLQRQ 1838>XP_006711514 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AKKFQRQ 8 AKK QRQ Sbjct: 1832 AKKLQRQ 1838>XP_006711513 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AKKFQRQ 8 AKK QRQ Sbjct: 1832 AKKLQRQ 1838>NP_003375 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKKFQRQT 9 AK+F R+T Sbjct: 146 AKRFSRKT 153>NP_008860 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AKKFQRQT 9 A+K+QR+T Sbjct: 78 ARKWQRKT 85>XP_006725560 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AKKFQRQT 9 A+K+QR+T Sbjct: 78 ARKWQRKT 85>XP_005268098 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKKFQRQT 9 AK+F R+T Sbjct: 146 AKRFSRKT 153>XP_006720310 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKKFQRQT 9 AK+F R+T Sbjct: 146 AKRFSRKT 153>XP_006715231 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AKKFQRQT 9 A+K+QR+T Sbjct: 78 ARKWQRKT 85Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.127 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,581 Number of extensions: 565 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |