Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_000479 17 2528 XP_005245255 17 2528 NP_004949 17 4312 NP_219499 17 4312 NP_056541 17 4312 XP_005250692 17 4312 XP_005250691 17 4312 XP_005263496 17 4312 XP_005263495 17 4312 NP_008835 16 5631 NP_001075109 16 5631 NP_001106954 16 5631 NP_001026910 16 5631 NP_689943 16 5631 XP_005266918 16 5631 NP_149043 16 7355 NP_001171588 16 7355 NP_115492 16 7355 NP_004888 16 7355 NP_076917 16 7355 NP_003889 16 7355 NP_001014402 16 7355 NP_008922 16 7355 NP_008999 16 7355 NP_001265137 16 7355 NP_001020026 16 7355 XP_006724176 16 7355 XP_006724175 16 7355 XP_006724174 16 7355 XP_006724173 16 7355 XP_005266631 16 7355 XP_006718141 16 7355 XP_006715655 16 7355 XP_006715654 16 7355 XP_005264840 16 7355 NP_055724 15 9605 NP_055692 15 9605 NP_997190 15 9605 XP_003403541 15 9605 XP_005257947 15 9605 XP_005257946 15 9605 XP_005257945 15 9605 XP_006722277 15 9605 XP_005247947 15 9605 XP_006713884 15 9605 XP_006713883 15 9605 XP_003846688 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2715 LVKGRDDLR 2723>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 1367 LVKGRDDLR 1375>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2367 LVKGRDDLR 2375>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2709 LVKGRDDLR 2717>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2715 LVKGRDDLR 2723>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2715 LVKGRDDLR 2723>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAKGRDDLR 9 L KGRDDLR Sbjct: 2715 LVKGRDDLR 2723>NP_000479 Length = 464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LAKGRDDL 8 +A+GRDDL Sbjct: 387 VAEGRDDL 394>XP_005245255 Length = 416 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LAKGRDDL 8 +A+GRDDL Sbjct: 339 VAEGRDDL 346>NP_004949 Length = 2549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KG +DLR Sbjct: 2185 LLKGHEDLR 2193>NP_219499 Length = 1663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 +A RDDLR Sbjct: 1549 IADSRDDLR 1557>NP_056541 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 LA G DDL+ Sbjct: 208 LASGSDDLK 216>XP_005250692 Length = 964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 +A RDDLR Sbjct: 850 IADSRDDLR 858>XP_005250691 Length = 1645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 +A RDDLR Sbjct: 1531 IADSRDDLR 1539>XP_005263496 Length = 2322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KG +DLR Sbjct: 1958 LLKGHEDLR 1966>XP_005263495 Length = 2549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KG +DLR Sbjct: 2185 LLKGHEDLR 2193>NP_008835 Length = 4128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KG +DLR Sbjct: 3751 LVKGGEDLR 3759>NP_001075109 Length = 4097 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KG +DLR Sbjct: 3751 LVKGGEDLR 3759>NP_001106954 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGRDDL 8 KGRDD+ Sbjct: 229 KGRDDI 234>NP_001026910 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KGRDDL 8 KGRDD+ Sbjct: 229 KGRDDI 234>NP_689943 Length = 1257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L GRDD+R Sbjct: 762 LEYGRDDVR 770>XP_005266918 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L GRDD+R Sbjct: 762 LEYGRDDVR 770>NP_149043 Length = 1018 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AKGRDDL 8 A+G+DDL Sbjct: 933 ARGQDDL 939>NP_001171588 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGRDDLR 9 KGR D+R Sbjct: 149 KGRQDMR 155>NP_115492 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 158 ARGRDD 163>NP_004888 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGRDDLR 9 KGR D+R Sbjct: 149 KGRQDMR 155>NP_076917 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GRDDLR 9 G+DDLR Sbjct: 25 GKDDLR 30>NP_003889 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 25 ARGRDD 30>NP_001014402 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 158 ARGRDD 163>NP_008922 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LAKGRDD 7 L KG+DD Sbjct: 16 LVKGKDD 22>NP_008999 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 303 LRKGRGELR 311>NP_001265137 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 248 LRKGRGELR 256>NP_001020026 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LAKGRDD 7 L KG+DD Sbjct: 16 LVKGKDD 22>XP_006724176 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 234 LRKGRGELR 242>XP_006724175 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 248 LRKGRGELR 256>XP_006724174 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 289 LRKGRGELR 297>XP_006724173 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 L KGR +LR Sbjct: 303 LRKGRGELR 311>XP_005266631 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 158 ARGRDD 163>XP_006718141 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGRDDLR 9 KGR D+R Sbjct: 149 KGRQDMR 155>XP_006715655 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 25 ARGRDD 30>XP_006715654 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGRDD 7 A+GRDD Sbjct: 25 ARGRDD 30>XP_005264840 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LAKGRDD 7 L KG+DD Sbjct: 16 LVKGKDD 22>NP_055724 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 GRDDLR 9 GRDD R Sbjct: 286 GRDDFR 291>NP_055692 Length = 1942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAKGRDDLR 9 LAKG D R Sbjct: 88 LAKGEDAFR 96>NP_997190 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 LAK RD L+ Sbjct: 283 LAKHRDSLK 291>XP_003403541 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAKGRDD 7 LAK RDD Sbjct: 49 LAKERDD 55>XP_005257947 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAKGRDDLR 9 LAKG D R Sbjct: 88 LAKGEDAFR 96>XP_005257946 Length = 1943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAKGRDDLR 9 LAKG D R Sbjct: 88 LAKGEDAFR 96>XP_005257945 Length = 1969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAKGRDDLR 9 LAKG D R Sbjct: 88 LAKGEDAFR 96>XP_006722277 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAKGRDDLR 9 LAKG D R Sbjct: 88 LAKGEDAFR 96>XP_005247947 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 LAK RD L+ Sbjct: 283 LAKHRDSLK 291>XP_006713884 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 LAK RD L+ Sbjct: 283 LAKHRDSLK 291>XP_006713883 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAKGRDDLR 9 LAK RD L+ Sbjct: 283 LAKHRDSLK 291>XP_003846688 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LAKGRDD 7 LAK RDD Sbjct: 49 LAKERDD 55Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.147 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 647,053 Number of extensions: 990 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |