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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_057502                                                              19     869
NP_861969                                                              19     869
NP_000259                                                              19     869
NP_861968                                                              19     869
NP_861966                                                              19     869
NP_861970                                                              19     869
NP_861546                                                              19     869
NP_861967                                                              19     869
NP_005474                                                              17    4312
NP_149059                                                              16    5631
NP_055752                                                              15    9605
NP_001230123                                                           15    9605
NP_057661                                                              15    9605
XP_006717782                                                           15    9605

>NP_057502
          Length = 590

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 384 LAEKAQITE 392



>NP_861969
          Length = 507

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 301 LAEKAQITE 309



>NP_000259
          Length = 595

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 384 LAEKAQITE 392



>NP_861968
          Length = 507

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 301 LAEKAQITE 309



>NP_861966
          Length = 548

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 342 LAEKAQITE 350



>NP_861970
          Length = 590

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 384 LAEKAQITE 392



>NP_861546
          Length = 590

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 384 LAEKAQITE 392



>NP_861967
          Length = 549

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LAEKAQITK 9
           LAEKAQIT+
Sbjct: 343 LAEKAQITE 351



>NP_005474
          Length = 956

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   AEKAQITK 9
           AEKA+IT+
Sbjct: 440 AEKAEITR 447



>NP_149059
          Length = 426

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   AEKAQIT 8
           AEKAQ+T
Sbjct: 252 AEKAQLT 258



>NP_055752
          Length = 1132

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LAEKAQITK 9
           +AE  QITK
Sbjct: 726 IAEMLQITK 734



>NP_001230123
          Length = 522

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LAEKAQITK 9
           +AE  QITK
Sbjct: 116 IAEMLQITK 124



>NP_057661
          Length = 208

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LAEKAQIT 8
           LA+K QIT
Sbjct: 130 LADKRQIT 137



>XP_006717782
          Length = 1089

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LAEKAQITK 9
           +AE  QITK
Sbjct: 683 IAEMLQITK 691



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.303    0.115    0.259 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 307,815
Number of extensions: 331
Number of successful extensions: 14
Number of sequences better than 10000.0: 14
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 14
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)