Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1935 NP_001075109 18 1935 NP_001271169 17 2528 NP_001271171 17 2528 XP_005269965 17 2528 XP_006717958 17 2528 XP_006717957 17 2528 NP_055758 17 4312 NP_945327 17 4312 XP_005250893 17 4312 XP_005250894 17 4312 NP_002378 16 5631 NP_001078846 16 5631 XP_005272048 16 5631 XP_006714680 16 5631 NP_258441 16 5631 NP_001070993 16 7355 XP_005260950 16 7355 XP_005260949 16 7355 XP_005260948 16 7355 XP_005260947 16 7355 XP_005265457 16 7355 NP_001070994 16 7355 NP_001129386 16 7355 NP_588616 15 9605 NP_001137160 15 9605 NP_001229698 15 9605 NP_001229696 15 9605 NP_056255 15 9605 NP_005483 15 9605 NP_001268659 15 9605 XP_005260696 15 9605 XP_005254203 15 9605 XP_005254204 15 9605 XP_005254202 15 9605 XP_005254201 15 9605 XP_005266968 15 9605 XP_005266967 15 9605 XP_005266964 15 9605 XP_006715114 15 9605 XP_006715113 15 9605 NP_036479 15 9605>NP_008835 Length = 4128 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAEARSDCS 9 LAEARSD S Sbjct: 2958 LAEARSDYS 2966>NP_001075109 Length = 4097 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LAEARSDCS 9 LAEARSD S Sbjct: 2958 LAEARSDYS 2966>NP_001271169 Length = 1047 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EARSDCS 9 EARS+CS Sbjct: 803 EARSECS 809>NP_001271171 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EARSDCS 9 EARS+CS Sbjct: 230 EARSECS 236>XP_005269965 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EARSDCS 9 EARS+CS Sbjct: 230 EARSECS 236>XP_006717958 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EARSDCS 9 EARS+CS Sbjct: 249 EARSECS 255>XP_006717957 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EARSDCS 9 EARS+CS Sbjct: 249 EARSECS 255>NP_055758 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAEARSDC 8 LAE+ SDC Sbjct: 822 LAESDSDC 829>NP_945327 Length = 599 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 LAEA DC Sbjct: 171 LAEAHPDC 178>XP_005250893 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAEARSDC 8 LAE+ SDC Sbjct: 822 LAESDSDC 829>XP_005250894 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LAEARSDC 8 LAE+ SDC Sbjct: 822 LAESDSDC 829>NP_002378 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAE R+ CS Sbjct: 707 LAELRTTCS 715>NP_001078846 Length = 1019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAE R+ CS Sbjct: 897 LAELRTTCS 905>XP_005272048 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAE R+ CS Sbjct: 729 LAELRTTCS 737>XP_006714680 Length = 1002 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAE R+ CS Sbjct: 880 LAELRTTCS 888>NP_258441 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 +AEA DC Sbjct: 1 MAEAEEDC 8>NP_001070993 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAEARS S Sbjct: 507 LAEARSSSS 515>XP_005260950 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAEARSDCS 9 LAE R CS Sbjct: 364 LAELRQGCS 372>XP_005260949 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAEARSDCS 9 LAE R CS Sbjct: 364 LAELRQGCS 372>XP_005260948 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAEARSDCS 9 LAE R CS Sbjct: 394 LAELRQGCS 402>XP_005260947 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LAEARSDCS 9 LAE R CS Sbjct: 394 LAELRQGCS 402>XP_005265457 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAEARS S Sbjct: 482 LAEARSSSS 490>NP_001070994 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LAEARSDCS 9 LAEARS S Sbjct: 507 LAEARSSSS 515>NP_001129386 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AEARSDCS 9 AEA S+CS Sbjct: 1020 AEALSNCS 1027>NP_588616 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 24 LKDARHDC 31>NP_001137160 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 107 LKDARHDC 114>NP_001229698 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>NP_001229696 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>NP_056255 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>NP_005483 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 ARSDC 8 ARSDC Sbjct: 91 ARSDC 95>NP_001268659 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 ARSDC 8 ARSDC Sbjct: 91 ARSDC 95>XP_005260696 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 ARSDC 8 ARSDC Sbjct: 91 ARSDC 95>XP_005254203 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 107 LKDARHDC 114>XP_005254204 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 24 LKDARHDC 31>XP_005254202 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 24 LKDARHDC 31>XP_005254201 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LAEARSDC 8 L +AR DC Sbjct: 90 LKDARHDC 97>XP_005266968 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>XP_005266967 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>XP_005266964 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EARSDCS 9 +ARS CS Sbjct: 56 QARSSCS 62>XP_006715114 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AEARSDC 8 AEA DC Sbjct: 12 AEAEEDC 18>XP_006715113 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AEARSDC 8 AEA DC Sbjct: 12 AEAEEDC 18>NP_036479 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AEARSDC 8 AEA DC Sbjct: 12 AEAEEDC 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.117 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 484,204 Number of extensions: 452 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |