Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001193988 17 4312 NP_001193987 17 4312 NP_006050 17 4312 XP_003960150 17 4312 XP_006720774 17 4312 XP_006720773 17 4312 XP_006720772 17 4312 XP_006720771 17 4312 XP_001721585 17 4312 NP_001001331 16 5631 NP_001123559 16 5631 NP_001123558 16 5631 NP_001123557 16 5631 NP_001123556 16 5631 NP_001674 16 5631 NP_065928 16 5631 NP_001273651 16 5631 NP_055427 16 5631 NP_001273652 16 5631 XP_005256527 16 5631 XP_005251899 16 5631 XP_005248087 16 5631 XP_006713990 16 5631 XP_005248084 16 5631 XP_006713989 16 5631 XP_005248081 16 5631 XP_005248080 16 5631 XP_005248079 16 5631 XP_006713988 16 5631 XP_005248077 16 5631 XP_006713987 16 5631 XP_006713986 16 5631 XP_006713984 16 5631 XP_006713245 16 5631 XP_006713244 16 5631 XP_006713243 16 5631 XP_006713242 16 5631 XP_006713241 16 5631 XP_006713240 16 5631 XP_006713239 16 5631 XP_005265236 16 5631 XP_006713238 16 5631 NP_115583 16 7355 NP_001275763 16 7355 NP_060009 16 7355 XP_006722984 16 7355 XP_006722983 16 7355 XP_006721125 16 7355 NP_699161 15 9605 NP_001157865 15 9605 NP_031384 15 9605 NP_055855 15 9605 NP_001424 15 9605 NP_001157864 15 9605 NP_001157863 15 9605 NP_001008537 15 9605 XP_006724709 15 9605 XP_006724708 15 9605 XP_006721832 15 9605 XP_006713582 15 9605 XP_006712426 15 9605 XP_006712425 15 9605 XP_006712424 15 9605>NP_001193988 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 283 ADSKKKSN 290>NP_001193987 Length = 500 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 322 ADSKKKSN 329>NP_006050 Length = 1575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 LAD+RKK+ Sbjct: 1370 LADTRKKT 1377>XP_003960150 Length = 169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 AD+R+KSS Sbjct: 108 ADNRRKSS 115>XP_006720774 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 261 ADSKKKSN 268>XP_006720773 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 261 ADSKKKSN 268>XP_006720772 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 261 ADSKKKSN 268>XP_006720771 Length = 550 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 ADS+KKS+ Sbjct: 372 ADSKKKSN 379>XP_001721585 Length = 169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 AD+R+KSS Sbjct: 108 ADNRRKSS 115>NP_001001331 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>NP_001123559 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 415 DNRKKSS 421>NP_001123558 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 404 DNRKKSS 410>NP_001123557 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 456 DNRKKSS 462>NP_001123556 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 456 DNRKKSS 462>NP_001674 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 325 ADDRKKAS 332>NP_065928 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 A+SRKKS+ Sbjct: 4368 AESRKKSA 4375>NP_001273651 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 LA+SRKK+ Sbjct: 615 LAESRKKT 622>NP_055427 Length = 1118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 LA+SRKK+ Sbjct: 616 LAESRKKT 623>NP_001273652 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 LA+SRKK+ Sbjct: 616 LAESRKKT 623>XP_005256527 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ADSRKKSS 9 A+SRKKS+ Sbjct: 4368 AESRKKSA 4375>XP_005251899 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 LA+SRKK+ Sbjct: 616 LAESRKKT 623>XP_005248087 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 409 DNRKKSS 415>XP_006713990 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 420 DNRKKSS 426>XP_005248084 Length = 564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 409 DNRKKSS 415>XP_006713989 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 420 DNRKKSS 426>XP_005248081 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 461 DNRKKSS 467>XP_005248080 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 494 DNRKKSS 500>XP_005248079 Length = 616 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 461 DNRKKSS 467>XP_006713988 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 505 DNRKKSS 511>XP_005248077 Length = 649 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 494 DNRKKSS 500>XP_006713987 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 505 DNRKKSS 511>XP_006713986 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 545 DNRKKSS 551>XP_006713984 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSRKKSS 9 D+RKKSS Sbjct: 545 DNRKKSS 551>XP_006713245 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 339 ADDRKKAS 346>XP_006713244 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 325 ADDRKKAS 332>XP_006713243 Length = 1199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>XP_006713242 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>XP_006713241 Length = 1212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 339 ADDRKKAS 346>XP_006713240 Length = 1232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 359 ADDRKKAS 366>XP_006713239 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>XP_005265236 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>XP_006713238 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 AD RKK+S Sbjct: 370 ADDRKKAS 377>NP_115583 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADSRKKS 8 A+SRKKS Sbjct: 513 AESRKKS 519>NP_001275763 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADSRKKS 8 A+SRKKS Sbjct: 513 AESRKKS 519>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ADSRKK 7 ADSRKK Sbjct: 1969 ADSRKK 1974>XP_006722984 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADSRKKS 8 A+SRKKS Sbjct: 159 AESRKKS 165>XP_006722983 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADSRKKS 8 A+SRKKS Sbjct: 513 AESRKKS 519>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ADSRKK 7 ADSRKK Sbjct: 1923 ADSRKK 1928>NP_699161 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DS+K+S Sbjct: 56 LSDSKKRS 63>NP_001157865 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DSRK++ Sbjct: 374 LSDSRKRT 381>NP_031384 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DSRK++ Sbjct: 476 LSDSRKRT 483>NP_055855 Length = 2098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 +DSR KSS Sbjct: 1706 SDSRPKSS 1713>NP_001424 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSRKKS 8 ADS KKS Sbjct: 393 ADSEKKS 399>NP_001157864 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DSRK++ Sbjct: 419 LSDSRKRT 426>NP_001157863 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DSRK++ Sbjct: 374 LSDSRKRT 381>NP_001008537 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LADSRKKSS 9 ++ SRKKSS Sbjct: 1172 VSKSRKKSS 1180>XP_006724709 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LADSRKKSS 9 ++ SRKKSS Sbjct: 1172 VSKSRKKSS 1180>XP_006724708 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LADSRKKSS 9 ++ SRKKSS Sbjct: 1172 VSKSRKKSS 1180>XP_006721832 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSRKKS 8 ADS KKS Sbjct: 508 ADSEKKS 514>XP_006713582 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSRKKS 8 L+DS+K+S Sbjct: 56 LSDSKKRS 63>XP_006712426 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 +DSR KSS Sbjct: 1012 SDSRPKSS 1019>XP_006712425 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 +DSR KSS Sbjct: 1012 SDSRPKSS 1019>XP_006712424 Length = 1376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADSRKKSS 9 +DSR KSS Sbjct: 984 SDSRPKSS 991Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.291 0.104 0.232 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,891 Number of extensions: 708 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |