Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721991 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_000085 17 2528 NP_055685 16 5631 NP_001077090 16 5631 NP_060626 16 7355 NP_056193 16 7355 NP_055489 16 7355 NP_004870 16 7355 NP_001277064 16 7355 NP_002968 16 7355 NP_004332 16 7355 NP_005432 16 7355 NP_001274143 16 7355 NP_001625 16 7355 NP_061841 16 7355 NP_003156 16 7355 NP_001274144 16 7355 XP_006713488 16 7355 XP_006713487 16 7355 XP_005246814 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 XP_006711953 16 7355 XP_006711952 16 7355 XP_006711951 16 7355 NP_001027392 16 7355 NP_015628 15 9605 NP_848695 15 9605 NP_848696 15 9605 NP_835465 15 9605 NP_001361 15 9605 XP_006721895 15 9605 XP_006712019 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1267 LADSMQTLF 1275>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1267 LADSMQTLF 1275>XP_006721991 Length = 1632 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1267 LADSMQTLF 1275>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1264 LADSMQTLF 1272>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1267 LADSMQTLF 1275>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LADSMQT F Sbjct: 1277 LADSMQTLF 1285>NP_000085 Length = 2944 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSMQTFF 9 DS+QTFF Sbjct: 1208 DSVQTFF 1214>NP_055685 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 LADS+Q F Sbjct: 96 LADSLQMF 103>NP_001077090 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 LADS+Q F Sbjct: 96 LADSLQMF 103>NP_060626 Length = 4363 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 L D+MQT+ Sbjct: 1005 LVDTMQTY 1012>NP_056193 Length = 4388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 L D+MQT+ Sbjct: 1005 LVDTMQTY 1012>NP_055489 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSMQTFF 9 DS+Q FF Sbjct: 436 DSLQAFF 442>NP_004870 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSMQTF 8 +ADS++TF Sbjct: 1 MADSVKTF 8>NP_001277064 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LADSMQTF 8 +ADS++TF Sbjct: 1 MADSVKTF 8>NP_002968 Length = 1977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LAD ++T+F Sbjct: 1584 LADLIETYF 1592>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 2007 LADSVQT 2013>NP_005432 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DSMQTFF 9 DSM++FF Sbjct: 231 DSMKSFF 237>NP_001274143 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DSMQTFF 9 DS+Q+FF Sbjct: 76 DSIQSFF 82>NP_001625 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DSMQTFF 9 DS+Q+FF Sbjct: 105 DSIQSFF 111>NP_061841 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSMQTF 8 ADS QTF Sbjct: 310 ADSSQTF 316>NP_003156 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADSMQTFF 9 ADS Q+F+ Sbjct: 150 ADSFQSFY 157>NP_001274144 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DSMQTFF 9 DS+Q+FF Sbjct: 36 DSIQSFF 42>XP_006713488 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSMQTFF 9 DS+Q FF Sbjct: 436 DSLQAFF 442>XP_006713487 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSMQTFF 9 DS+Q FF Sbjct: 436 DSLQAFF 442>XP_005246814 Length = 1988 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LADSMQTFF 9 LAD ++T+F Sbjct: 1595 LADLIETYF 1603>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 1944 LADSVQT 1950>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 1961 LADSVQT 1967>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 1973 LADSVQT 1979>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 1990 LADSVQT 1996>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LADSMQT 7 LADS+QT Sbjct: 2024 LADSVQT 2030>XP_006711953 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSMQTF 8 ADS QTF Sbjct: 85 ADSSQTF 91>XP_006711952 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSMQTF 8 ADS QTF Sbjct: 224 ADSSQTF 230>XP_006711951 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ADSMQTF 8 ADS QTF Sbjct: 251 ADSSQTF 257>NP_001027392 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADSMQTFF 9 ADS Q+F+ Sbjct: 150 ADSFQSFY 157>NP_015628 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 DSMQTFF 9 D M TFF Sbjct: 60 DDMDTFF 66>NP_848695 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LADSMQ 6 LADSMQ Sbjct: 372 LADSMQ 377>NP_848696 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LADSMQ 6 LADSMQ Sbjct: 372 LADSMQ 377>NP_835465 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DSMQTF 8 D+MQTF Sbjct: 226 DNMQTF 231>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 +ADS+Q F Sbjct: 3793 MADSLQEF 3800>XP_006721895 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DSMQTF 8 D+MQTF Sbjct: 226 DNMQTF 231>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LADSMQTF 8 +ADS+Q F Sbjct: 3793 MADSLQEF 3800Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.136 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,076 Number of extensions: 601 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |