Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 299 NP_001087241 20 299 XP_005265799 20 299 XP_005265798 20 299 XP_005265797 20 299 NP_005202 20 390 NP_001275634 20 390 NP_004110 19 665 NP_543149 17 3301 NP_001188512 17 3301 NP_543150 17 3301 NP_003238 17 3301 NP_001124194 17 3301 XP_006724526 17 3301 XP_005274501 17 3301 XP_005262816 17 3301 NP_057383 17 4312 NP_660335 16 5631 NP_005048 16 5631 NP_001180201 16 5631 NP_001180202 16 5631 XP_006715926 16 5631 XP_006715925 16 5631 XP_006711540 16 5631 XP_006711539 16 5631 XP_005245458 16 5631 XP_005245457 16 5631 XP_005245456 16 5631 XP_005245455 16 5631 NP_060264 16 7355 NP_079160 16 7355 NP_001269779 16 7355 NP_065196 16 7355 NP_001116436 16 7355 NP_071898 16 7355 NP_872432 16 7355 NP_115682 16 7355 XP_005259715 16 7355 XP_005268134 16 7355 XP_005268132 16 7355 XP_005251551 16 7355 XP_006716857 16 7355 XP_005264505 16 7355 XP_005264504 16 7355 XP_005264503 16 7355 XP_005264502 16 7355 XP_005264501 16 7355 XP_005264499 16 7355 NP_004813 15 9605 NP_003464 15 9605 NP_004531 15 9605 NP_055104 15 9605 NP_208384 15 9605 NP_001032412 15 9605 NP_001020368 15 9605 XP_006724072 15 9605 XP_005261045 15 9605 XP_006724071 15 9605 XP_006724070 15 9605 XP_006721658 15 9605 XP_005252660 15 9605 NP_003991 15 9605 NP_001020370 15 9605>NP_000213 Length = 976 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVVKGNAR Sbjct: 823 YVVKGNAR 830>NP_001087241 Length = 972 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVVKGNAR Sbjct: 819 YVVKGNAR 826>XP_005265799 Length = 973 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVVKGNAR Sbjct: 820 YVVKGNAR 827>XP_005265798 Length = 976 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVVKGNAR Sbjct: 823 YVVKGNAR 830>XP_005265797 Length = 977 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVVKGNAR Sbjct: 824 YVVKGNAR 831>NP_005202 Length = 972 Score = 20.0 bits (40), Expect = 390 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 Y+VKGNAR Sbjct: 809 YIVKGNAR 816>NP_001275634 Length = 972 Score = 20.0 bits (40), Expect = 390 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 Y+VKGNAR Sbjct: 809 YIVKGNAR 816>NP_004110 Length = 993 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 YVV+GNAR Sbjct: 842 YVVRGNAR 849>NP_543149 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 39 YIVKGNRK 46>NP_001188512 Length = 306 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 39 YIVKGNRK 46>NP_543150 Length = 329 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 42 YIVKGNRK 49>NP_003238 Length = 1172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 YV KG+AR Sbjct: 191 YVAKGSAR 198>NP_001124194 Length = 508 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KYVVKGNA 8 KY+V GN+ Sbjct: 7 KYIVNGNS 14>XP_006724526 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 39 YIVKGNRK 46>XP_005274501 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 39 YIVKGNRK 46>XP_005262816 Length = 329 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+VKGN + Sbjct: 42 YIVKGNRK 49>NP_057383 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 K+ V+GNAR Sbjct: 248 KHDVRGNAR 256>NP_660335 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KYVVKGNAR 9 KYV GN R Sbjct: 403 KYVTYGNIR 411>NP_005048 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 264 EYIVAGSAR 272>NP_001180201 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 264 EYIVAGSAR 272>NP_001180202 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 137 EYIVAGSAR 145>XP_006715926 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KYVVKGNAR 9 KYV GN R Sbjct: 403 KYVTYGNIR 411>XP_006715925 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KYVVKGNAR 9 KYV GN R Sbjct: 403 KYVTYGNIR 411>XP_006711540 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 23 EYIVAGSAR 31>XP_006711539 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 299 EYIVAGSAR 307>XP_005245458 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 264 EYIVAGSAR 272>XP_005245457 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 299 EYIVAGSAR 307>XP_005245456 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 299 EYIVAGSAR 307>XP_005245455 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KYVVKGNAR 9 +Y+V G+AR Sbjct: 299 EYIVAGSAR 307>NP_060264 Length = 1801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVKGNA 8 VVKGNA Sbjct: 955 VVKGNA 960>NP_079160 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVVKGN 7 Y+VKGN Sbjct: 294 YLVKGN 299>NP_001269779 Length = 817 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 575 RYITKGN 581>NP_065196 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 522 RYITKGN 528>NP_001116436 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 607 RYITKGN 613>NP_071898 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVKGNAR 9 V+KGN R Sbjct: 33 VIKGNGR 39>NP_872432 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVVKGN 7 YV+KGN Sbjct: 36 YVLKGN 41>NP_115682 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 Y+++G+AR Sbjct: 165 YILRGSAR 172>XP_005259715 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YVVKGNAR 9 Y+++G+AR Sbjct: 139 YILRGSAR 146>XP_005268134 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVVKGN 7 Y+VKGN Sbjct: 112 YLVKGN 117>XP_005268132 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVVKGN 7 Y+VKGN Sbjct: 294 YLVKGN 299>XP_005251551 Length = 1801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVKGNA 8 VVKGNA Sbjct: 955 VVKGNA 960>XP_006716857 Length = 1834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVKGNA 8 VVKGNA Sbjct: 988 VVKGNA 993>XP_005264505 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 302 RYITKGN 308>XP_005264504 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 399 RYITKGN 405>XP_005264503 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 522 RYITKGN 528>XP_005264502 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 554 RYITKGN 560>XP_005264501 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 554 RYITKGN 560>XP_005264499 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 +Y+ KGN Sbjct: 607 RYITKGN 613>NP_004813 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KYVVKGNA 8 KY++ GNA Sbjct: 554 KYLLLGNA 561>NP_003464 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+V GNA+ Sbjct: 414 YLVAGNAQ 421>NP_004531 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KYVVKGN 7 KY++KG+ Sbjct: 256 KYILKGS 262>NP_055104 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KYVVKGN 7 KY+ KGN Sbjct: 460 KYLKKGN 466>NP_208384 Length = 2080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 YVVKGN 7 YV KGN Sbjct: 189 YVAKGN 194>NP_001032412 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 YVVKGN 7 YV KGN Sbjct: 758 YVAKGN 763>NP_001020368 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 YVVKGN 7 Y VKGN Sbjct: 316 YAVKGN 321>XP_006724072 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KYVVKGN 7 KY++KG+ Sbjct: 92 KYILKGS 98>XP_005261045 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KYVVKGN 7 KY++KG+ Sbjct: 92 KYILKGS 98>XP_006724071 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KYVVKGN 7 KY++KG+ Sbjct: 256 KYILKGS 262>XP_006724070 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KYVVKGN 7 KY++KG+ Sbjct: 256 KYILKGS 262>XP_006721658 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KYVVKGNA 8 KY++ GNA Sbjct: 554 KYLLLGNA 561>XP_005252660 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YVVKGNAR 9 Y+V GNA+ Sbjct: 364 YLVAGNAQ 371>NP_003991 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 YVVKGN 7 Y VKGN Sbjct: 326 YAVKGN 331>NP_001020370 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 YVVKGN 7 Y VKGN Sbjct: 247 YAVKGN 252Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 562,957 Number of extensions: 1018 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |