Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_659475 15 9605 NP_942133 15 9605 NP_942131 15 9605 NP_942134 15 9605 NP_942135 15 9605 NP_942136 15 9605 NP_001119576 15 9605 NP_037409 15 9605 NP_001119575 15 9605 NP_055646 15 9605 XP_006725384 15 9605 XP_006725383 15 9605 XP_005257324 15 9605 XP_005257323 15 9605 XP_006721916 15 9605 XP_006719423 15 9605 XP_006719422 15 9605 XP_005268873 15 9605 XP_005268872 15 9605 XP_005268870 15 9605 XP_005268871 15 9605 XP_005268869 15 9605 XP_005268868 15 9605 XP_006713495 15 9605 XP_005264695 15 9605 XP_005264694 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 3004 KVAERVLMR 3012>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 1656 KVAERVLMR 1664>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 2656 KVAERVLMR 2664>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 2998 KVAERVLMR 3006>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 3004 KVAERVLMR 3012>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 3004 KVAERVLMR 3012>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 KV ERVLMR Sbjct: 3004 KVAERVLMR 3012>NP_659475 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 ++VE +LMR Sbjct: 456 QIVEEMLMR 464>NP_942133 Length = 2346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 116 KVIEKVLI 123>NP_942131 Length = 2383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 153 KVIEKVLI 160>NP_942134 Length = 2288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 58 KVIEKVLI 65>NP_942135 Length = 2268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 38 KVIEKVLI 45>NP_942136 Length = 2346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 116 KVIEKVLI 123>NP_001119576 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>NP_037409 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>NP_001119575 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>NP_055646 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KVV+RVL+ Sbjct: 2569 KVVKRVLV 2576>XP_006725384 Length = 2268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 38 KVIEKVLI 45>XP_006725383 Length = 2338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 116 KVIEKVLI 123>XP_005257324 Length = 2268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 38 KVIEKVLI 45>XP_005257323 Length = 2268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 38 KVIEKVLI 45>XP_006721916 Length = 2375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KV+E+VL+ Sbjct: 153 KVIEKVLI 160>XP_006719423 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_006719422 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268873 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268872 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268870 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268871 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268869 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 526 KVVERLL 532>XP_005268868 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVVERVL 7 KVVER+L Sbjct: 545 KVVERLL 551>XP_006713495 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KVVERVLM 8 KVV+RVL+ Sbjct: 2613 KVVKRVLV 2620>XP_005264695 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 ++VE +LMR Sbjct: 116 QIVEEMLMR 124>XP_005264694 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVVERVLMR 9 ++VE +LMR Sbjct: 250 QIVEEMLMR 258Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.146 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 308,639 Number of extensions: 383 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |