Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 509 XP_005251865 18 1935 XP_005251864 18 1935 NP_055745 18 1935 NP_001155048 17 3301 NP_056404 17 3301 NP_001191195 17 4312 NP_001191196 17 4312 NP_000800 17 4312 NP_001123465 17 4312 XP_006714066 17 4312 XP_005264664 17 4312 XP_005264663 17 4312 XP_005264662 17 4312 NP_115895 17 4312 NP_001258625 16 5631 NP_001258627 16 5631 NP_004290 16 5631 NP_001258628 16 5631 NP_777596 16 5631 NP_001258626 16 5631 NP_443171 16 5631 XP_006711210 16 5631 XP_006711209 16 5631 XP_005244929 16 5631 XP_006711208 16 5631 NP_001160006 16 7355 NP_001160005 16 7355 XP_005248604 16 7355 XP_005248602 16 7355 NP_001136021 16 7355 NP_077726 16 7355 NP_443075 15 9605 NP_001258152 15 9605 NP_001273659 15 9605 NP_201567 15 9605 NP_001092093 15 9605 NP_536856 15 9605 NP_612191 15 9605 NP_612190 15 9605 NP_113648 15 9605 NP_066984 15 9605 NP_001128583 15 9605 XP_005251914 15 9605 XP_006717092 15 9605 XP_006717091 15 9605 XP_005251912 15 9605 XP_006717090 15 9605 XP_006715302 15 9605 XP_006711892 15 9605 XP_006711891 15 9605 XP_006711890 15 9605 XP_006711889 15 9605 XP_005273367 15 9605 XP_005273366 15 9605 XP_006711888 15 9605 XP_006711887 15 9605 XP_005273362 15 9605 XP_005273361 15 9605 XP_006711886 15 9605 XP_006711885 15 9605 XP_005273359 15 9605 XP_006711884 15 9605 XP_005273357 15 9605 XP_005273356 15 9605 XP_005273358 15 9605 XP_005273355 15 9605 XP_005273353 15 9605 XP_005273352 15 9605 XP_005273354 15 9605 XP_005273349 15 9605 XP_006711883 15 9605 XP_005273350 15 9605 XP_005273351 15 9605 XP_006711882 15 9605 XP_005273348 15 9605 XP_005273346 15 9605 XP_005273347 15 9605 XP_005273345 15 9605 XP_005273344 15 9605>NP_004351 Length = 882 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTLNTVG 8 KVTLNTVG Sbjct: 113 KVTLNTVG 120>XP_005251865 Length = 682 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 VTLNTVG Sbjct: 12 VTLNTVG 18>XP_005251864 Length = 683 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 VTLNTVG Sbjct: 12 VTLNTVG 18>NP_055745 Length = 683 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 VTLNTVG Sbjct: 12 VTLNTVG 18>NP_001155048 Length = 630 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 T+NT+GT Sbjct: 228 TINTIGT 234>NP_056404 Length = 718 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 T+NT+GT Sbjct: 228 TINTIGT 234>NP_001191195 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVTLNTVG 8 K T+NT+G Sbjct: 468 KTTVNTIG 475>NP_001191196 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVTLNTVG 8 K T+NT+G Sbjct: 417 KTTVNTIG 424>NP_000800 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVTLNTVG 8 K T+NT+G Sbjct: 487 KTTVNTIG 494>NP_001123465 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 +LNTVGT Sbjct: 429 SLNTVGT 435>XP_006714066 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVTLNTVG 8 K T+NT+G Sbjct: 477 KTTVNTIG 484>XP_005264664 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 +LNTVGT Sbjct: 283 SLNTVGT 289>XP_005264663 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 +LNTVGT Sbjct: 429 SLNTVGT 435>XP_005264662 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 +LNTVGT Sbjct: 429 SLNTVGT 435>NP_115895 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLNTVGT 9 +LNTVGT Sbjct: 429 SLNTVGT 435>NP_001258625 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 296 VTLGTLGT 303>NP_001258627 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 270 VTLGTLGT 277>NP_004290 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 297 VTLGTLGT 304>NP_001258628 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 257 VTLGTLGT 264>NP_777596 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 346 VTLGTLGT 353>NP_001258626 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLNTVGT 9 VTL T+GT Sbjct: 256 VTLGTLGT 263>NP_443171 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLNTVGT 9 VTLN GT Sbjct: 558 VTLNVTGT 565>XP_006711210 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLNTVGT 9 VTLN GT Sbjct: 309 VTLNVTGT 316>XP_006711209 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLNTVGT 9 VTLN GT Sbjct: 558 VTLNVTGT 565>XP_005244929 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLNTVGT 9 VTLN GT Sbjct: 471 VTLNVTGT 478>XP_006711208 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLNTVGT 9 VTLN GT Sbjct: 558 VTLNVTGT 565>NP_001160006 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 552 KSTLNTAG 559>NP_001160005 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 681 KSTLNTAG 688>XP_005248604 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 643 KSTLNTAG 650>XP_005248602 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 677 KSTLNTAG 684>NP_001136021 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 667 KSTLNTAG 674>NP_077726 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KVTLNTVG 8 K TLNT G Sbjct: 701 KSTLNTAG 708>NP_443075 Length = 6620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4312 KVTLEDAGT 4320>NP_001258152 Length = 8923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5269 KVTLEDAGT 5277>NP_001273659 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 531 TINTVG 536>NP_201567 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLNTVG 8 VTL TVG Sbjct: 208 VTLTTVG 214>NP_001092093 Length = 7968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4312 KVTLEDAGT 4320>NP_536856 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 531 TINTVG 536>NP_612191 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLNTVG 8 VTL TVG Sbjct: 277 VTLTTVG 283>NP_612190 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLNTVG 8 VTL TVG Sbjct: 277 VTLTTVG 283>NP_113648 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 +TL+TVG Sbjct: 217 ITLSTVG 223>NP_066984 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLNTVG 8 VTL TVG Sbjct: 272 VTLTTVG 278>NP_001128583 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 +TL+TVG Sbjct: 217 ITLSTVG 223>XP_005251914 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 498 TINTVG 503>XP_006717092 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 549 TINTVG 554>XP_006717091 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 549 TINTVG 554>XP_005251912 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 531 TINTVG 536>XP_006717090 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TLNTVG 8 T+NTVG Sbjct: 549 TINTVG 554>XP_006715302 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLNTVG 8 +TL+TVG Sbjct: 217 ITLSTVG 223>XP_006711892 Length = 6865 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4557 KVTLEDAGT 4565>XP_006711891 Length = 8925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5269 KVTLEDAGT 5277>XP_006711890 Length = 6957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4649 KVTLEDAGT 4657>XP_006711889 Length = 7297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273367 Length = 7677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273366 Length = 7678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_006711888 Length = 8059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4221 KVTLEDAGT 4229>XP_006711887 Length = 8499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4661 KVTLEDAGT 4669>XP_005273362 Length = 8675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4837 KVTLEDAGT 4845>XP_005273361 Length = 8763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 4925 KVTLEDAGT 4933>XP_006711886 Length = 8833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5177 KVTLEDAGT 5185>XP_006711885 Length = 8835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5177 KVTLEDAGT 5185>XP_005273359 Length = 8843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5005 KVTLEDAGT 5013>XP_006711884 Length = 8847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273357 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5013 KVTLEDAGT 5021>XP_005273356 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5013 KVTLEDAGT 5021>XP_005273358 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5013 KVTLEDAGT 5021>XP_005273355 Length = 8924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5086 KVTLEDAGT 5094>XP_005273353 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5097 KVTLEDAGT 5105>XP_005273352 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5097 KVTLEDAGT 5105>XP_005273354 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5097 KVTLEDAGT 5105>XP_005273349 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5101 KVTLEDAGT 5109>XP_006711883 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5101 KVTLEDAGT 5109>XP_005273350 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5101 KVTLEDAGT 5109>XP_005273351 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5101 KVTLEDAGT 5109>XP_006711882 Length = 8977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5139 KVTLEDAGT 5147>XP_005273348 Length = 9015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5177 KVTLEDAGT 5185>XP_005273346 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273347 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273345 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197>XP_005273344 Length = 9027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVTLNTVGT 9 KVTL GT Sbjct: 5189 KVTLEDAGT 5197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.123 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 331,050 Number of extensions: 567 Number of successful extensions: 80 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |