Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036284 18 1935 XP_006710605 18 1935 NP_078966 16 7355 NP_115618 16 7355 XP_006723004 16 7355 XP_006713726 16 7355 NP_000252 15 9605 NP_001243783 15 9605 NP_001243823 15 9605 NP_001229260 15 9605 NP_001229259 15 9605 NP_001243788 15 9605 NP_001243789 15 9605 NP_001229256 15 9605 NP_001229255 15 9605 NP_001243781 15 9605 NP_001229257 15 9605 NP_001229258 15 9605 NP_001229261 15 9605 NP_001243796 15 9605 NP_001243784 15 9605 NP_001243786 15 9605 NP_001243792 15 9605 NP_001243790 15 9605 XP_006710304 15 9605 NP_958804 15 9605>NP_036284 Length = 353 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VSKTLTLN 9 VSKTLT+N Sbjct: 93 VSKTLTVN 100>XP_006710605 Length = 353 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VSKTLTLN 9 VSKTLT+N Sbjct: 93 VSKTLTVN 100>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTLTLN 9 KTLTLN Sbjct: 14075 KTLTLN 14080>NP_115618 Length = 1896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTLTLN 9 KTLTLN Sbjct: 1501 KTLTLN 1506>XP_006723004 Length = 6443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTLTLN 9 KTLTLN Sbjct: 6011 KTLTLN 6016>XP_006713726 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTLTLN 9 KTLTLN Sbjct: 1519 KTLTLN 1524>NP_000252 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSKTLTL 8 +SKTLT+ Sbjct: 459 ISKTLTI 465>NP_001243783 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243823 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229260 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229259 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243788 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243789 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229256 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229255 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243781 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229257 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229258 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229261 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243796 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243784 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243786 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243792 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243790 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270>XP_006710304 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 45 SKTLTLH 51>NP_958804 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKTLTLN 9 SKTLTL+ Sbjct: 264 SKTLTLH 270Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.116 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 263,272 Number of extensions: 198 Number of successful extensions: 26 Number of sequences better than 10000.0: 26 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 26 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |