Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 390 NP_001087241 20 390 XP_006714101 20 390 XP_005265799 20 390 XP_005265798 20 390 XP_005265797 20 390 NP_055750 17 3301 NP_148978 17 3301 NP_006192 17 3301 XP_006724598 17 3301 XP_006724597 17 3301 XP_005272672 17 3301 XP_005272671 17 3301 XP_006711286 17 3301 XP_005245025 17 3301 XP_005245024 17 3301 XP_006711285 17 3301 XP_006711284 17 3301 XP_006711283 17 3301 XP_006711282 17 3301 XP_006711281 17 3301 XP_006711280 17 3301 XP_006711279 17 3301 XP_006711278 17 3301 XP_006711277 17 3301 XP_005245023 17 3301 XP_006711276 17 3301 XP_006711275 17 3301 NP_001163931 17 3301 NP_001229392 17 4312 NP_006411 17 4312 XP_006723746 17 4312 XP_005260309 17 4312 NP_002649 16 7355 NP_001138503 16 7355 NP_002438 16 7355 NP_001231866 16 7355 NP_001074003 16 7355 NP_001254824 16 7355 NP_597712 16 7355 XP_005261390 16 7355 XP_005261387 16 7355 XP_005261386 16 7355 XP_006724195 16 7355 XP_005261385 16 7355 XP_005254452 16 7355 XP_005254451 16 7355 XP_006717956 16 7355 XP_005265227 16 7355 NP_001255213 15 9605 NP_001028222 15 9605 NP_079474 15 9605 NP_079337 15 9605 XP_005272554 15 9605 XP_006719676 15 9605 XP_006719675 15 9605 NP_699189 15 9605 NP_001123357 15 9605>NP_000213 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>NP_001087241 Length = 972 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>XP_006714101 Length = 526 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>XP_005265799 Length = 973 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>XP_005265798 Length = 976 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>XP_005265797 Length = 977 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVRPAFKVV 9 KVRPAFK V Sbjct: 203 KVRPAFKAV 211>NP_055750 Length = 1048 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 856 RPAYKVV 862>NP_148978 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 492 RPAFRVV 498>NP_006192 Length = 496 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 486 RPAFRVV 492>XP_006724598 Length = 496 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 486 RPAFRVV 492>XP_006724597 Length = 496 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 486 RPAFRVV 492>XP_005272672 Length = 496 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 486 RPAFRVV 492>XP_005272671 Length = 543 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 533 RPAFRVV 539>XP_006711286 Length = 1021 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 829 RPAYKVV 835>XP_005245025 Length = 1156 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 964 RPAYKVV 970>XP_005245024 Length = 1177 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 985 RPAYKVV 991>XP_006711285 Length = 1193 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1001 RPAYKVV 1007>XP_006711284 Length = 1193 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1001 RPAYKVV 1007>XP_006711283 Length = 1193 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1001 RPAYKVV 1007>XP_006711282 Length = 1227 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1035 RPAYKVV 1041>XP_006711281 Length = 1233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1041 RPAYKVV 1047>XP_006711280 Length = 1251 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1059 RPAYKVV 1065>XP_006711279 Length = 1254 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1062 RPAYKVV 1068>XP_006711278 Length = 1256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1064 RPAYKVV 1070>XP_006711277 Length = 1280 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1109 RPAYKVV 1115>XP_005245023 Length = 1281 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1089 RPAYKVV 1095>XP_006711276 Length = 1283 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1091 RPAYKVV 1097>XP_006711275 Length = 1301 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPA+KVV Sbjct: 1109 RPAYKVV 1115>NP_001163931 Length = 570 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 RPAF+VV Sbjct: 560 RPAFRVV 566>NP_001229392 Length = 262 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRPAFK 7 VRPAFK Sbjct: 123 VRPAFK 128>NP_006411 Length = 1785 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP FK+V Sbjct: 890 VRPMFKLV 897>XP_006723746 Length = 1177 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP FK+V Sbjct: 282 VRPMFKLV 289>XP_005260309 Length = 1784 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP FK+V Sbjct: 889 VRPMFKLV 896>NP_002649 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 +RP FK++ Sbjct: 173 LRPRFKII 180>NP_001138503 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 +RP FK++ Sbjct: 156 LRPRFKII 163>NP_002438 Length = 1400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP F+V+ Sbjct: 1330 VRPTFRVL 1337>NP_001231866 Length = 1351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP F+V+ Sbjct: 1281 VRPTFRVL 1288>NP_001074003 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KVRPAFK 7 ++RP+FK Sbjct: 967 RIRPSFK 973>NP_001254824 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>NP_597712 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_005261390 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_005261387 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_005261386 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_006724195 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_005261385 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP +KV+ Sbjct: 77 VRPTYKVM 84>XP_005254452 Length = 2188 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KVRPAFK 7 ++RP+FK Sbjct: 967 RIRPSFK 973>XP_005254451 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KVRPAFK 7 ++RP+FK Sbjct: 967 RIRPSFK 973>XP_006717956 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 +RP FK++ Sbjct: 173 LRPRFKII 180>XP_005265227 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPAFKVV 9 VRP F+V+ Sbjct: 1331 VRPTFRVL 1338>NP_001255213 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 +PAFKV+ Sbjct: 14 QPAFKVL 20>NP_001028222 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVRPAFKVV 9 KVRP F V Sbjct: 370 KVRPLFNPV 378>NP_079474 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVRPAFKVV 9 KVRP F V Sbjct: 370 KVRPLFNPV 378>NP_079337 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 +PAFKV+ Sbjct: 14 QPAFKVL 20>XP_005272554 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RPAFKVV 9 +PAFKV+ Sbjct: 14 QPAFKVL 20>XP_006719676 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVRPAFKVV 9 KVRP F V Sbjct: 370 KVRPLFNPV 378>XP_006719675 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KVRPAFKVV 9 KVRP F V Sbjct: 370 KVRPLFNPV 378>NP_699189 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RPAFKV 8 RPAF+V Sbjct: 340 RPAFRV 345>NP_001123357 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VRPAFK 7 V+PAFK Sbjct: 115 VKPAFK 120Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.143 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 582,126 Number of extensions: 675 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |