Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 18 1935 NP_004561 18 1935 NP_061956 18 1935 NP_001275703 18 1935 XP_005253450 18 1935 XP_006719151 18 1935 XP_005271003 18 1935 XP_005271002 18 1935 NP_115495 17 4312 NP_002464 16 5631 NP_705838 16 5631 NP_064627 16 5631 NP_055227 16 5631 NP_057063 16 5631 NP_001139281 16 5631 NP_001271183 16 5631 NP_001271181 16 5631 NP_001271180 16 5631 NP_001070654 16 5631 NP_004821 16 5631 NP_113632 16 5631 NP_079005 16 5631 NP_001257451 16 5631 NP_001257450 16 5631 XP_006723449 16 5631 XP_006715675 16 5631 XP_005267280 16 5631 XP_006713328 16 5631 XP_006713327 16 5631 XP_006713326 16 5631 XP_006713325 16 5631 XP_006713324 16 5631 XP_005265385 16 5631 NP_000920 15 9605 NP_002058 15 9605 NP_444251 15 9605 NP_001183980 15 9605 XP_006710759 15 9605 XP_006710758 15 9605 XP_005245953 15 9605 XP_006710757 15 9605 XP_006710756 15 9605 XP_005245952 15 9605 XP_006710755 15 9605 XP_005245950 15 9605 XP_005245949 15 9605 XP_005245948 15 9605 XP_006710754 15 9605>NP_001275701 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K LIEKVTT Sbjct: 476 KGLIEKVTT 484>NP_004561 Length = 1445 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K LIEKVTT Sbjct: 476 KGLIEKVTT 484>NP_061956 Length = 481 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLIEKVTT 9 +L+EKVTT Sbjct: 213 ILVEKVTT 220>NP_001275703 Length = 1264 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K LIEKVTT Sbjct: 254 KGLIEKVTT 262>XP_005253450 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K LIEKVTT Sbjct: 476 KGLIEKVTT 484>XP_006719151 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K LIEKVTT Sbjct: 476 KGLIEKVTT 484>XP_005271003 Length = 340 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLIEKVTT 9 +L+EKVTT Sbjct: 72 ILVEKVTT 79>XP_005271002 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLIEKVTT 9 +L+EKVTT Sbjct: 199 ILVEKVTT 206>NP_115495 Length = 6306 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIEKVTT 9 LIEK+TT Sbjct: 5670 LIEKITT 5676>NP_002464 Length = 1960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K+ +EKVTT Sbjct: 961 KLQLEKVTT 969>NP_705838 Length = 4069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVLIEKVTT 9 KVL+EK T Sbjct: 2626 KVLVEKTKT 2634Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVLIEKVTT 9 KVL+EK T Sbjct: 2714 KVLVEKTKT 2722>NP_064627 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 433 KSLIEKVT 440>NP_055227 Length = 228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 KVL+EK T Sbjct: 14 KVLLEKAT 21>NP_057063 Length = 1365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>NP_001139281 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K+ +EKVTT Sbjct: 1026 KLQLEKVTT 1034>NP_001271183 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 KVL+EK T Sbjct: 123 KVLVEKCT 130>NP_001271181 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 KVL+EK T Sbjct: 179 KVLVEKCT 186>NP_001271180 Length = 296 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 KVL+EK T Sbjct: 179 KVLVEKCT 186>NP_001070654 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K+ +EKVTT Sbjct: 993 KLQLEKVTT 1001>NP_004821 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>NP_113632 Length = 240 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 KVL+EK T Sbjct: 123 KVLVEKCT 130>NP_079005 Length = 1995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K+ +EKVTT Sbjct: 985 KLQLEKVTT 993>NP_001257451 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>NP_001257450 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>XP_006723449 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 K+ +EKVTT Sbjct: 993 KLQLEKVTT 1001>XP_006715675 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>XP_005267280 Length = 1374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 KV++EK+ T Sbjct: 139 KVILEKILT 147>XP_006713328 Length = 992 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 433 KSLIEKVT 440>XP_006713327 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 68 KSLIEKVT 75>XP_006713326 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 433 KSLIEKVT 440>XP_006713325 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 433 KSLIEKVT 440>XP_006713324 Length = 1285 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 433 KSLIEKVT 440>XP_005265385 Length = 1291 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K LIEKVT Sbjct: 336 KSLIEKVT 343>NP_000920 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>NP_002058 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVLIEKVTT 9 +V +EKVTT Sbjct: 115 EVDVEKVTT 123>NP_444251 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IEKVTT 9 IEKVTT Sbjct: 116 IEKVTT 121>NP_001183980 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IEKVTT 9 IEKVTT Sbjct: 116 IEKVTT 121>XP_006710759 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_006710758 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_005245953 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_006710757 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_006710756 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_005245952 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_006710755 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_005245950 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 26 KSMIEKVT 33>XP_005245949 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 57 KSMIEKVT 64>XP_005245948 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 57 KSMIEKVT 64>XP_006710754 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVLIEKVT 8 K +IEKVT Sbjct: 57 KSMIEKVT 64Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.129 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,428 Number of extensions: 517 Number of successful extensions: 49 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |