Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 299 NP_001036064 18 1135 NP_005226 18 1135 NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 XP_005246434 18 1135 XP_005246433 18 1135 XP_005246432 18 1135 XP_006712427 18 1135 NP_079463 17 4312 XP_005256234 17 4312 XP_005256235 17 4312 XP_006721347 17 4312 NP_004422 16 5631 NP_775926 16 5631 NP_001265229 16 5631 NP_001073917 16 5631 NP_490595 16 5631 NP_001258652 16 5631 NP_110420 16 5631 XP_006714860 16 5631 XP_006714859 16 5631 XP_005268570 16 5631 XP_006713657 16 5631 XP_006713656 16 5631 XP_006713655 16 5631 XP_005263889 16 5631 XP_006712890 16 5631 XP_005263888 16 5631 XP_005263887 16 5631 XP_005245809 16 5631 XP_005245808 16 5631 NP_001232 16 5631 NP_937784 16 7355 NP_001788 16 7355 XP_005255824 16 7355 XP_005255823 16 7355 XP_005255821 16 7355 XP_005255820 16 7355 XP_005255819 16 7355 XP_005255818 16 7355 NP_001268695 15 9605 NP_872272 15 9605 NP_001787 15 9605 NP_004430 15 9605 NP_001268694 15 9605 NP_001268696 15 9605 XP_005255817 15 9605 XP_005255816 15 9605 XP_005265710 15 9605>NP_005219 Length = 1210 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KVKIPIAIK 9 KVKIP+AIK Sbjct: 737 KVKIPVAIK 745>NP_001036064 Length = 1292 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 744 VKIPVAIK 751>NP_005226 Length = 1308 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 744 VKIPVAIK 751>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 746 VKIPVAIK 753>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 746 VKIPVAIK 753>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 731 VKIPVAIK 738>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 716 VKIPVAIK 723>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 716 VKIPVAIK 723>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 827 VKIPVAIK 834>XP_005246434 Length = 1282 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 734 VKIPVAIK 741>XP_005246433 Length = 1298 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 734 VKIPVAIK 741>XP_005246432 Length = 1307 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 759 VKIPVAIK 766>XP_006712427 Length = 1323 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VKIPIAIK 9 VKIP+AIK Sbjct: 759 VKIPVAIK 766>NP_079463 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256234 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256235 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_006721347 Length = 519 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 KIP+AIK Sbjct: 425 KIPLAIK 431>NP_004422 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 638 KKEVPVAIK 646>NP_775926 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 141 KREIPVAIK 149>NP_001265229 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 141 KREIPVAIK 149>NP_001073917 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 749 KREIPVAIK 757>NP_490595 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 483 KMKIPIA 489>NP_001258652 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVKIPIAIK 9 K+KIPI K Sbjct: 182 KLKIPIGAK 190>NP_110420 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVKIPIAIK 9 K+KIPI K Sbjct: 182 KLKIPIGAK 190>XP_006714860 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVKIPIAIK 9 K+KIPI K Sbjct: 182 KLKIPIGAK 190>XP_006714859 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVKIPIAIK 9 K+KIPI K Sbjct: 182 KLKIPIGAK 190>XP_005268570 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVKIPIAIK 9 K+KIPI K Sbjct: 182 KLKIPIGAK 190>XP_006713657 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 115 KREIPVAIK 123>XP_006713656 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 115 KREIPVAIK 123>XP_006713655 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K +IP+AIK Sbjct: 765 KREIPVAIK 773>XP_005263889 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 308 KMKIPIA 314>XP_006712890 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 339 KMKIPIA 345>XP_005263888 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 339 KMKIPIA 345>XP_005263887 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 462 KMKIPIA 468>XP_005245809 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 584 KKEVPVAIK 592>XP_005245808 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 627 KKEVPVAIK 635>NP_001232 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVKIPIA 7 K+KIPIA Sbjct: 483 KMKIPIA 489>NP_937784 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKIPIAI 8 VKIP+A+ Sbjct: 760 VKIPVAL 766>NP_001788 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255824 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255823 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255821 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255820 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255819 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>XP_005255818 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 + K+P+AI+ Sbjct: 469 EAKVPVAIR 477>NP_001268695 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 678 KRELPVAIK 686>NP_872272 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 677 KRELPVAIK 685>NP_001787 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 ++P+AIK Sbjct: 479 RVPVAIK 485>NP_004430 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 699 KRELPVAIK 707>NP_001268694 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 700 KRELPVAIK 708>NP_001268696 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 700 KRELPVAIK 708>XP_005255817 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 ++P+AIK Sbjct: 479 RVPVAIK 485>XP_005255816 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KIPIAIK 9 ++P+AIK Sbjct: 479 RVPVAIK 485>XP_005265710 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KVKIPIAIK 9 K ++P+AIK Sbjct: 536 KRELPVAIK 544Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.145 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 503,952 Number of extensions: 612 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |