Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006726390 18 1135 XP_006726389 18 1135 XP_006726388 18 1135 XP_006726387 18 1135 XP_006711142 18 1135 XP_006711141 18 1135 XP_006711140 18 1135 XP_006710131 18 1135 XP_006710130 18 1135 XP_006710129 18 1135 XP_006710128 18 1135 NP_149162 17 3301 NP_001835 17 3301 XP_006719305 17 3301 XP_006712967 17 4312 NP_004632 16 5631 NP_001182555 16 5631 NP_001171619 16 5631 NP_005928 16 5631 XP_006725391 16 5631 XP_006725389 16 5631 XP_006725388 16 5631 XP_006725387 16 5631 XP_005257438 16 5631 XP_006721974 16 5631 XP_006721973 16 5631 XP_005257436 16 5631 XP_005252669 16 5631 XP_006717572 16 5631 XP_005252667 16 5631 XP_005252666 16 5631 XP_005252665 16 5631 XP_005252663 16 5631 XP_005252662 16 5631 XP_005262946 16 5631 XP_005262945 16 5631 NP_001120965 16 7355 NP_066187 16 7355 NP_001139 16 7355 NP_055897 16 7355 XP_006714257 16 7355 XP_006714256 16 7355 XP_006714255 16 7355 XP_005263005 16 7355 XP_006714254 16 7355 XP_006714253 16 7355 XP_005263002 16 7355 XP_005262999 16 7355 XP_006714252 16 7355 XP_006714251 16 7355 XP_006714250 16 7355 NP_001186170 15 9605 NP_001153399 15 9605 NP_996985 15 9605 NP_001153401 15 9605 NP_003928 15 9605 NP_659407 15 9605 XP_006724591 15 9605 XP_006724590 15 9605 XP_006724589 15 9605 XP_005272646 15 9605 NP_001028170 15 9605>XP_006726390 Length = 1353 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006726389 Length = 1471 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006726388 Length = 1489 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006726387 Length = 1497 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006711142 Length = 1471 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006711141 Length = 1489 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006711140 Length = 1497 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006710131 Length = 1353 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006710130 Length = 1471 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006710129 Length = 1489 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>XP_006710128 Length = 1497 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AARLRCQ Sbjct: 251 AARLRCQ 257>NP_149162 Length = 1418 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VAARLRCQ 9 VAA LRCQ Sbjct: 17 VAAVLRCQ 24>NP_001835 Length = 1487 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VAARLRCQ 9 VAA LRCQ Sbjct: 17 VAAVLRCQ 24>XP_006719305 Length = 1488 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VAARLRCQ 9 VAA LRCQ Sbjct: 17 VAAVLRCQ 24>XP_006712967 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AARLRC 8 AARLRC Sbjct: 29 AARLRC 34>NP_004632 Length = 1027 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>NP_001182555 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>NP_001171619 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ARLRCQ 9 AR+RCQ Sbjct: 67 ARIRCQ 72>NP_005928 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006725391 Length = 992 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006725389 Length = 1067 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006725388 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006725387 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_005257438 Length = 992 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006721974 Length = 1067 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_006721973 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_005257436 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 60 AARVRCE 66>XP_005252669 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_006717572 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005252667 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005252666 Length = 1057 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005252665 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005252663 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005252662 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AARLRCQ 9 AAR+RC+ Sbjct: 77 AARVRCE 83>XP_005262946 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ARLRCQ 9 AR+RCQ Sbjct: 67 ARIRCQ 72>XP_005262945 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ARLRCQ 9 AR+RCQ Sbjct: 67 ARIRCQ 72>NP_001120965 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1331 IEARLRC 1337>NP_066187 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1340 IEARLRC 1346>NP_001139 Length = 3957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1340 IEARLRC 1346>NP_055897 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 VAA LRC Sbjct: 356 VAASLRC 362>XP_006714257 Length = 4145 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1349 IEARLRC 1355>XP_006714256 Length = 1901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1369 IEARLRC 1375>XP_006714255 Length = 1970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1357 IEARLRC 1363>XP_005263005 Length = 2019 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1339 IEARLRC 1345>XP_006714254 Length = 2049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1369 IEARLRC 1375>XP_006714253 Length = 2069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1369 IEARLRC 1375>XP_005263002 Length = 4072 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1307 IEARLRC 1313>XP_005262999 Length = 4147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1351 IEARLRC 1357>XP_006714252 Length = 4153 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1357 IEARLRC 1363>XP_006714251 Length = 4165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1369 IEARLRC 1375>XP_006714250 Length = 4190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VAARLRC 8 + ARLRC Sbjct: 1394 IEARLRC 1400>NP_001186170 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AA L+C Sbjct: 15 RIAAELKC 22>NP_001153399 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 +VAA L+C Sbjct: 266 QVAAHLKC 273>NP_996985 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 +VAA L+C Sbjct: 336 QVAAHLKC 343>NP_001153401 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 +VAA L+C Sbjct: 317 QVAAHLKC 324>NP_003928 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AA L+C Sbjct: 15 RIAAELKC 22>NP_659407 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AARL C Sbjct: 5 ELAARLNC 12>XP_006724591 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AARL C Sbjct: 5 ELAARLNC 12>XP_006724590 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AARL C Sbjct: 56 ELAARLNC 63>XP_006724589 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AARL C Sbjct: 56 ELAARLNC 63>XP_005272646 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AARL C Sbjct: 56 ELAARLNC 63>NP_001028170 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KVAARLRC 8 ++AA L+C Sbjct: 15 RIAAELKC 22Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,024 Number of extensions: 430 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |