Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001191676 17 4312 NP_002904 17 4312 NP_055876 17 4312 XP_006716804 17 4312 NP_001124162 16 5631 NP_653309 16 5631 NP_055640 16 5631 XP_006715384 16 5631 NP_008969 16 7355 NP_055524 16 7355 NP_525021 16 7355 NP_001072982 16 7355 NP_001275585 16 7355 XP_005255340 16 7355 XP_005255337 16 7355 XP_005255336 16 7355 XP_005255335 16 7355 XP_005255334 16 7355 NP_002244 15 9605 NP_001273130 15 9605 NP_079006 15 9605 NP_001611 15 9605 NP_001243355 15 9605 NP_940685 15 9605 NP_001257304 15 9605 XP_006719215 15 9605 XP_006718751 15 9605 XP_006718750 15 9605 XP_005274303 15 9605 XP_005274301 15 9605 XP_005274300 15 9605 XP_005274299 15 9605 XP_005274298 15 9605 XP_005274297 15 9605 XP_006714133 15 9605 XP_005262753 15 9605 XP_006714131 15 9605 XP_005262752 15 9605 XP_005262750 15 9605 XP_006714130 15 9605 XP_006714129 15 9605 NP_001094070 15 9605>NP_001191676 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 KTKKAR T Sbjct: 237 KTKKARKDT 245>NP_002904 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 KTKKAR T Sbjct: 237 KTKKARKDT 245>NP_055876 Length = 1056 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 K KARFST Sbjct: 992 KRVKARFST 1000>XP_006716804 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 K KARFST Sbjct: 1025 KRVKARFST 1033>NP_001124162 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KTKKARFS 8 KTK+ RFS Sbjct: 328 KTKEIRFS 335>NP_653309 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KTKKARFS 8 K K+ARFS Sbjct: 165 KEKRARFS 172>NP_055640 Length = 2271 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 KT+K RF T Sbjct: 259 KTQKVRFFT 267>XP_006715384 Length = 772 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KTKKARFS 8 KTK+ RFS Sbjct: 311 KTKEIRFS 318>NP_008969 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 KTKK +ST Sbjct: 556 KTKKKYYST 564>NP_055524 Length = 3546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KTKKARFST 9 KT+K FST Sbjct: 2766 KTEKLMFST 2774>NP_525021 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KTKKARFST 9 +TKK+ FST Sbjct: 1207 ETKKSCFST 1215>NP_001072982 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>NP_001275585 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>XP_005255340 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>XP_005255337 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>XP_005255336 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>XP_005255335 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>XP_005255334 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 K+KK++FS Sbjct: 214 KSKKSKFS 221>NP_002244 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KTKKARF 7 KTK ARF Sbjct: 939 KTKGARF 945>NP_001273130 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 +T+KA+FS Sbjct: 61 QTQKAKFS 68>NP_079006 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 +T+KA+FS Sbjct: 62 QTQKAKFS 69>NP_001611 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3346 KSKKSRF 3352>NP_001243355 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 200 TKKAKFDS 207>NP_940685 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KTKKARF 7 KTK ARF Sbjct: 11 KTKYARF 17>NP_001257304 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KTKKARF 7 KTK ARF Sbjct: 11 KTKYARF 17>XP_006719215 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KTKKARFS 8 +T+KA+FS Sbjct: 62 QTQKAKFS 69>XP_006718751 Length = 3489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 945 KSKKSRF 951>XP_006718750 Length = 4001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 1457 KSKKSRF 1463>XP_005274303 Length = 4506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 1962 KSKKSRF 1968>XP_005274301 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3346 KSKKSRF 3352>XP_005274300 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3218 KSKKSRF 3224>XP_005274299 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3218 KSKKSRF 3224>XP_005274298 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3346 KSKKSRF 3352>XP_005274297 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KTKKARF 7 K+KK+RF Sbjct: 3346 KSKKSRF 3352>XP_006714133 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 180 TKKAKFDS 187>XP_005262753 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 194 TKKAKFDS 201>XP_006714131 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 205 TKKAKFDS 212>XP_005262752 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 303 TKKAKFDS 310>XP_005262750 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 309 TKKAKFDS 316>XP_006714130 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 314 TKKAKFDS 321>XP_006714129 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKKARFST 9 TKKA+F + Sbjct: 314 TKKAKFDS 321>NP_001094070 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KTKKARF 7 KTK ARF Sbjct: 11 KTKYARF 17Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.112 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,948 Number of extensions: 587 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |