Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001035957 20 509 XP_006721991 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_872327 17 2528 NP_612567 17 4312 NP_003257 17 4312 NP_612564 17 4312 NP_000258 16 5631 NP_001091995 16 5631 NP_115655 16 5631 NP_660279 16 5631 NP_060674 16 5631 XP_005258041 16 5631 XP_006721988 16 5631 XP_005266401 16 5631 XP_005266400 16 5631 XP_005247886 16 5631 XP_006713849 16 5631 XP_005247010 16 5631 NP_001273616 16 5631 NP_001273615 16 5631 NP_008958 15 9605 NP_878918 15 9605 NP_055995 15 9605 NP_055928 15 9605 NP_078966 15 9605 NP_002733 15 9605 NP_057351 15 9605 NP_703154 15 9605 NP_057290 15 9605 NP_872586 15 9605 NP_116269 15 9605 NP_001073350 15 9605 NP_001073349 15 9605 NP_075463 15 9605 NP_057541 15 9605 XP_005256619 15 9605 XP_006721549 15 9605 XP_006721548 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_005267916 15 9605 XP_006720147 15 9605 XP_005267517 15 9605 XP_005267516 15 9605 XP_005267515 15 9605 XP_005267514 15 9605 XP_005267513 15 9605 XP_005267512 15 9605 XP_005267511 15 9605 XP_006719812 15 9605 XP_005266941 15 9605 XP_005266940 15 9605 XP_005247133 15 9605 XP_006713202 15 9605 XP_005264810 15 9605 XP_005264809 15 9605 XP_006713201 15 9605 NP_150597 15 9605 NP_853655 15 9605>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1390 KSVVSQRFP 1398>XP_006721991 Length = 1632 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1400 KSVVSQRFP 1408>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1400 KSVVSQRFP 1408>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1400 KSVVSQRFP 1408>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1400 KSVVSQRFP 1408>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1387 KSVVSQRFP 1395>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1390 KSVVSQRFP 1398>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 KSVVSQ FP Sbjct: 1400 KSVVSQRFP 1408>NP_872327 Length = 633 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSQHFP 9 +SQHFP Sbjct: 489 ISQHFP 494>NP_612567 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 VVSQHF Sbjct: 536 VVSQHF 541>NP_003257 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 VVSQHF Sbjct: 696 VVSQHF 701>NP_612564 Length = 839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 VVSQHF Sbjct: 736 VVSQHF 741>NP_000258 Length = 2818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVSQHFP 9 VVSQ FP Sbjct: 1371 VVSQRFP 1377>NP_001091995 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 388 SVVTQHEP 395>NP_115655 Length = 1196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 V+SQHF Sbjct: 802 VISQHF 807>NP_660279 Length = 401 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSVVSQH 7 KSV++QH Sbjct: 141 KSVITQH 147>NP_060674 Length = 682 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 387 SVVTQHEP 394>XP_005258041 Length = 2836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVSQHFP 9 VVSQ FP Sbjct: 1371 VVSQRFP 1377>XP_006721988 Length = 2846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VVSQHFP 9 VVSQ FP Sbjct: 1381 VVSQRFP 1387>XP_005266401 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 340 SVVTQHEP 347>XP_005266400 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 382 SVVTQHEP 389>XP_005247886 Length = 1127 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 V+SQHF Sbjct: 802 VISQHF 807>XP_006713849 Length = 1147 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVSQHF 8 V+SQHF Sbjct: 753 VISQHF 758>XP_005247010 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSVVSQH 7 KSV++QH Sbjct: 68 KSVITQH 74>NP_001273616 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 387 SVVTQHEP 394>NP_001273615 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVVSQHFP 9 SVV+QH P Sbjct: 339 SVVTQHEP 346>NP_008958 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSVVSQH 7 ++VVSQH Sbjct: 792 RAVVSQH 798>NP_878918 Length = 6907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>NP_055995 Length = 6885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 1464 SVVEEHF 1470>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S VSQ FP Sbjct: 5595 STVSQGFP 5602>NP_002733 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S+V Q FP Sbjct: 83 SIVDQKFP 90>NP_057351 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 39 SVVDEHF 45>NP_703154 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 97 SVVDEHF 103>NP_057290 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 100 SVVDEHF 106>NP_872586 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 97 SVVDEHF 103>NP_116269 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSVVSQHFP 9 ++VVS+ FP Sbjct: 267 ETVVSREFP 275>NP_001073350 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S+V Q FP Sbjct: 75 SIVDQKFP 82>NP_001073349 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S+V Q FP Sbjct: 75 SIVDQKFP 82>NP_075463 Length = 3013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S VSQ FP Sbjct: 1339 SEVSQRFP 1346>NP_057541 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S+V Q FP Sbjct: 75 SIVDQKFP 82>XP_005256619 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 80 SVVEEHF 86>XP_006721549 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 80 SVVEEHF 86>XP_006721548 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 385 SVVEEHF 391>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 1465 SVVEEHF 1471>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 1465 SVVEEHF 1471>XP_005267916 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S+V Q FP Sbjct: 83 SIVDQKFP 90>XP_006720147 Length = 4788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267517 Length = 6883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267516 Length = 6884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267515 Length = 6899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267514 Length = 6908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267513 Length = 6921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267512 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_005267511 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSVVSQHF 8 KSV+ HF Sbjct: 1829 KSVLQDHF 1836>XP_006719812 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVVSQHFP 9 S VSQ FP Sbjct: 1336 SEVSQRFP 1343>XP_005266941 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 97 SVVDEHF 103>XP_005266940 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 97 SVVDEHF 103>XP_005247133 Length = 1517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSVVSQH 7 ++VVSQH Sbjct: 787 RAVVSQH 793>XP_006713202 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 47 SVVDEHF 53>XP_005264810 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 50 SVVDEHF 56>XP_005264809 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 100 SVVDEHF 106>XP_006713201 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVVSQHF 8 SVV +HF Sbjct: 99 SVVDEHF 105>NP_150597 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVVSQH 7 SV+SQH Sbjct: 50 SVISQH 55>NP_853655 Length = 65 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VVSQHFP 9 ++SQH P Sbjct: 42 LISQHLP 48Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.126 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 539,330 Number of extensions: 707 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |