Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 390 XP_005273257 20 390 XP_005251977 16 5631 NP_001004451 16 5631 NP_473448 16 5631 NP_001258747 16 7355 NP_001258748 16 7355 NP_001119812 16 7355 NP_004220 16 7355 NP_056364 16 7355 NP_116220 16 7355 XP_005272757 16 7355 XP_005272756 16 7355 XP_005267570 16 7355 XP_006720171 16 7355 XP_005267569 16 7355 XP_005267568 16 7355 XP_006720170 16 7355 XP_006720169 16 7355 NP_056130 15 9605 NP_001275918 15 9605 NP_001159451 15 9605 NP_001026868 15 9605 NP_004216 15 9605 NP_777360 15 9605 NP_057425 15 9605 NP_219479 15 9605 NP_002807 15 9605 XP_006719964 15 9605 XP_006719963 15 9605 XP_006719962 15 9605 XP_006719961 15 9605 XP_006719960 15 9605 XP_005266656 15 9605 XP_006719393 15 9605 XP_006719392 15 9605 XP_006719391 15 9605 XP_006719390 15 9605 XP_006719389 15 9605 XP_006719388 15 9605 XP_006719387 15 9605 XP_006717953 15 9605 XP_006717952 15 9605 XP_006717951 15 9605 XP_006717950 15 9605 XP_006717949 15 9605 XP_006717948 15 9605 XP_005248705 15 9605 XP_006715387 15 9605 XP_006715386 15 9605 XP_006714838 15 9605 XP_005268463 15 9605 XP_005268461 15 9605 NP_004285 15 9605>NP_064450 Length = 1722 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVQLDSHQ 9 SVQLDSHQ Sbjct: 795 SVQLDSHQ 802>XP_005273257 Length = 1726 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVQLDSHQ 9 SVQLDSHQ Sbjct: 799 SVQLDSHQ 806>XP_005251977 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VQLDSH 8 +QLDSH Sbjct: 49 IQLDSH 54>NP_001004451 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VQLDSH 8 +QLDSH Sbjct: 49 IQLDSH 54>NP_473448 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VQLDSH 8 +QLDSH Sbjct: 49 IQLDSH 54>NP_001258747 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 VQLD H+ Sbjct: 242 VQLDGHE 248>NP_001258748 Length = 177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 VQLD H+ Sbjct: 165 VQLDGHE 171>NP_001119812 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 VQLD H+ Sbjct: 242 VQLDGHE 248>NP_004220 Length = 1454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VQLDSHQ 9 VQL++HQ Sbjct: 4 VQLENHQ 10>NP_056364 Length = 1163 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 488 QLDAHQ 493>NP_116220 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 VQLD H+ Sbjct: 242 VQLDGHE 248>XP_005272757 Length = 1410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VQLDSHQ 9 VQL++HQ Sbjct: 4 VQLENHQ 10>XP_005272756 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VQLDSHQ 9 VQL++HQ Sbjct: 4 VQLENHQ 10>XP_005267570 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 544 QLDAHQ 549>XP_006720171 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 565 QLDAHQ 570>XP_005267569 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 665 QLDAHQ 670>XP_005267568 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 665 QLDAHQ 670>XP_006720170 Length = 1354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 679 QLDAHQ 684>XP_006720169 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLDSHQ 9 QLD+HQ Sbjct: 686 QLDAHQ 691>NP_056130 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 KSVQ SH+ Sbjct: 108 KSVQPQSHK 116>NP_001275918 Length = 2286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>NP_001159451 Length = 1994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 544 SIQADVHQ 551>NP_001026868 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 887 QLDDHQ 892>NP_004216 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVQLDSH 8 SVQ++SH Sbjct: 899 SVQINSH 905>NP_777360 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QLD H+ Sbjct: 211 IQLDQHE 217>NP_057425 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>NP_219479 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 +S +LD HQ Sbjct: 90 RSSELDRHQ 98>NP_002807 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QLD H+ Sbjct: 231 IQLDQHE 237>XP_006719964 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_006719963 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_006719962 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_006719961 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_006719960 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_005266656 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29>XP_006719393 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 861 QLDDHQ 866>XP_006719392 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 869 QLDDHQ 874>XP_006719391 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 888 QLDDHQ 893>XP_006719390 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 895 QLDDHQ 900>XP_006719389 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 896 QLDDHQ 901>XP_006719388 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 949 QLDDHQ 954>XP_006719387 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QLDSHQ 9 QLD HQ Sbjct: 950 QLDDHQ 955>XP_006717953 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 544 SIQADVHQ 551>XP_006717952 Length = 2300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>XP_006717951 Length = 2315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>XP_006717950 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>XP_006717949 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>XP_006717948 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SVQLDSHQ 9 S+Q D HQ Sbjct: 852 SIQADVHQ 859>XP_005248705 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 +S +LD HQ Sbjct: 15 RSSELDRHQ 23>XP_006715387 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 +S +LD HQ Sbjct: 24 RSSELDRHQ 32>XP_006715386 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 +S +LD HQ Sbjct: 24 RSSELDRHQ 32>XP_006714838 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 KSVQ SH+ Sbjct: 44 KSVQPQSHK 52>XP_005268463 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 KSVQ SH+ Sbjct: 185 KSVQPQSHK 193>XP_005268461 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSVQLDSHQ 9 KSVQ SH+ Sbjct: 185 KSVQPQSHK 193>NP_004285 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VQLDSHQ 9 +QL SHQ Sbjct: 23 IQLHSHQ 29Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.114 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 477,443 Number of extensions: 530 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |