Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 20 509 NP_733762 20 509 XP_006713860 20 509 XP_006713859 20 509 XP_005247910 20 509 XP_005247909 20 509 NP_001106881 18 1482 NP_002776 18 1482 NP_976032 18 1482 NP_001866 17 2528 NP_001116105 17 2528 NP_001116106 17 2528 NP_001034568 17 2528 XP_005268301 17 2528 XP_006720407 17 2528 NP_291021 17 3301 NP_001091976 17 3301 NP_001275702 17 3301 NP_001277042 17 3301 NP_057313 17 3301 XP_006725459 17 3301 XP_006725458 17 3301 XP_006725457 17 3301 XP_005278454 17 3301 XP_005278453 17 3301 XP_006718315 17 3301 XP_005253032 17 3301 XP_006718314 17 3301 XP_005253031 17 3301 XP_006718313 17 3301 XP_005253030 17 3301 NP_000831 17 4312 NP_085143 17 4312 NP_001123481 17 4312 NP_872431 17 4312 XP_006719218 17 4312 XP_006712069 17 4312 XP_006712068 17 4312 XP_005262670 17 4312 NP_000724 16 5631 NP_006436 16 5631 NP_996882 16 5631 NP_057092 16 5631 NP_112536 16 5631 NP_056337 16 5631 XP_005264422 16 5631 XP_005264421 16 5631 NP_001180393 16 5631 NP_008821 16 7355 NP_001278414 16 7355 NP_653309 16 7355 NP_660339 16 7355 NP_065744 16 7355 XP_005258677 16 7355 XP_005258487 16 7355 NP_006197 15 9605 NP_055598 15 9605 NP_000928 15 9605 NP_443132 15 9605 NP_001026836 15 9605 NP_955389 15 9605 NP_937757 15 9605 NP_937756 15 9605 XP_006725628 15 9605 XP_006725627 15 9605 XP_005254865 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 NP_001026979 15 9605 NP_006129 15 9605>NP_005179 Length = 906 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 225 KSTIDLTCN 233>NP_733762 Length = 982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 217 KSTIDLTCN 225>XP_006713860 Length = 914 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 245 KSTIDLTCN 253>XP_006713859 Length = 966 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 245 KSTIDLTCN 253>XP_005247910 Length = 982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 217 KSTIDLTCN 225>XP_005247909 Length = 1010 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 KSTI LTCN Sbjct: 245 KSTIDLTCN 253>NP_001106881 Length = 213 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIVLTCN 9 T++LTCN Sbjct: 42 TVILTCN 48>NP_002776 Length = 335 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIVLTCN 9 T++LTCN Sbjct: 164 TVILTCN 170>NP_976032 Length = 213 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIVLTCN 9 T++LTCN Sbjct: 42 TVILTCN 48>NP_001866 Length = 1500 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSTIVLTCN 9 K T+V+ CN Sbjct: 1008 KKTVVVNCN 1016>NP_001116105 Length = 1506 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSTIVLTCN 9 K T+V+ CN Sbjct: 1014 KKTVVVNCN 1022>NP_001116106 Length = 1049 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSTIVLTCN 9 K T+V+ CN Sbjct: 557 KKTVVVNCN 565>NP_001034568 Length = 823 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STIVLTC 8 ST+VLTC Sbjct: 175 STLVLTC 181>XP_005268301 Length = 662 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STIVLTC 8 ST+VLTC Sbjct: 14 STLVLTC 20>XP_006720407 Length = 813 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STIVLTC 8 ST+VLTC Sbjct: 165 STLVLTC 171>NP_291021 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>NP_001091976 Length = 293 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>NP_001275702 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 31 KGSVVLTCH 39>NP_001277042 Length = 164 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 31 KGSVVLTCH 39>NP_057313 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_006725459 Length = 164 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 31 KGSVVLTCH 39>XP_006725458 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>XP_006725457 Length = 293 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>XP_005278454 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>XP_005278453 Length = 293 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 K ++VLTC+ Sbjct: 159 KGSVVLTCH 167>XP_006718315 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253032 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_006718314 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253031 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_006718313 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 242 KSTLILVC 249>XP_005253030 Length = 336 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST++L C Sbjct: 302 KSTLILVC 309>NP_000831 Length = 879 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KSTIVLTCN 9 + T++L CN Sbjct: 723 RETVILKCN 731>NP_085143 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST+V TC Sbjct: 139 KSTLVPTC 146>NP_001123481 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 +T+V TCN Sbjct: 760 NTVVKTCN 767>NP_872431 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 +T+V TCN Sbjct: 760 NTVVKTCN 767>XP_006719218 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 KST+V TC Sbjct: 139 KSTLVPTC 146>XP_006712069 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 +T+V TCN Sbjct: 760 NTVVKTCN 767>XP_006712068 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 +T+V TCN Sbjct: 760 NTVVKTCN 767>XP_005262670 Length = 908 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 +T+V TCN Sbjct: 760 NTVVKTCN 767>NP_000724 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 STIVLTC 8 +T++LTC Sbjct: 43 TTVILTC 49>NP_006436 Length = 2335 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KSTIVLTCN 9 + TI++TC+ Sbjct: 2209 EKTIIITCS 2217>NP_996882 Length = 1551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 S+I+L CN Sbjct: 1522 SSIILDCN 1529>NP_057092 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_112536 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TIVLTCN 9 T++LTC+ Sbjct: 164 TVILTCD 170>NP_056337 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 K+TI+L C Sbjct: 44 KTTIILRC 51>XP_005264422 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 K+TI+L C Sbjct: 44 KTTIILRC 51>XP_005264421 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_001180393 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSTIVLTC 8 K+TI+L C Sbjct: 44 KTTIILRC 51>NP_008821 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSTIVLTC 8 K +VLTC Sbjct: 161 KDIVVLTC 168>NP_001278414 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSTIVLTC 8 K +VLTC Sbjct: 161 KDIVVLTC 168>NP_653309 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 STIVLTCN 9 STIVLT N Sbjct: 1228 STIVLTGN 1235>NP_660339 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 T+VLTC Sbjct: 240 TLVLTC 245>NP_065744 Length = 2113 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 STIVLTC 8 ST++L+C Sbjct: 390 STVILSC 396>XP_005258677 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 T+VLTC Sbjct: 240 TLVLTC 245>XP_005258487 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KSTIVLTC 8 K +VLTC Sbjct: 140 KDIVVLTC 147>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 TIV+TC Sbjct: 230 TIVVTC 235>NP_055598 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KSTIVLTC 8 K+T++L+C Sbjct: 154 KATLLLSC 161>NP_000928 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 S +VL CN Sbjct: 975 SKVVLPCN 982>NP_443132 Length = 3538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI+ CN Sbjct: 1271 STIIYGCN 1278>NP_001026836 Length = 91 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI + CN Sbjct: 67 STIAMWCN 74>NP_955389 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KSTIVLTC 8 K+T++L+C Sbjct: 154 KATLLLSC 161>NP_937757 Length = 3667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI+ CN Sbjct: 1335 STIIYGCN 1342>NP_937756 Length = 3707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI+ CN Sbjct: 1375 STIIYGCN 1382>XP_006725628 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KSTIVLTC 8 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_006725627 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KSTIVLTC 8 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_005254865 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 KSTIVLTC 8 K+T++L+C Sbjct: 154 KATLLLSC 161>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 TIV+TC Sbjct: 255 TIVVTC 260>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 TIV+TC Sbjct: 230 TIVVTC 235>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 TIV+TC Sbjct: 252 TIVVTC 257>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TIVLTC 8 TIV+TC Sbjct: 255 TIVVTC 260>NP_001026979 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI + CN Sbjct: 144 STIAMWCN 151>NP_006129 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STIVLTCN 9 STI + CN Sbjct: 190 STIAMWCN 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.126 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,464 Number of extensions: 756 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |