Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 869 NP_004561 19 869 NP_001275703 19 869 XP_005253450 19 869 XP_006719151 19 869 XP_005270863 17 3301 XP_005270862 17 3301 XP_006710667 17 3301 XP_006710666 17 3301 NP_001139108 17 3301 NP_775105 17 4312 NP_001036148 17 4312 NP_001182005 17 4312 XP_006723251 17 4312 XP_006715506 17 4312 XP_006715505 17 4312 XP_006715504 17 4312 XP_006715503 17 4312 XP_006715502 17 4312 XP_005264359 17 4312 NP_001073943 17 4312 NP_733936 16 5631 NP_001071 16 5631 NP_065795 16 7355 NP_001190187 16 7355 NP_001032 16 7355 NP_644814 16 7355 NP_056178 16 7355 NP_001139799 16 7355 NP_001139798 16 7355 NP_004680 16 7355 NP_542172 16 7355 XP_006721859 16 7355 XP_005247225 16 7355 XP_005247224 16 7355 XP_005264515 16 7355 XP_005264513 16 7355 NP_997218 16 7355 NP_001138890 15 9605 NP_036221 15 9605 NP_001264880 15 9605 NP_001264876 15 9605 NP_001264878 15 9605 NP_783163 15 9605 NP_001099022 15 9605 NP_001099021 15 9605 NP_001099020 15 9605 NP_001099019 15 9605 NP_036408 15 9605 NP_001268366 15 9605 NP_004730 15 9605 NP_001264881 15 9605 NP_001264877 15 9605 NP_001264875 15 9605 NP_060770 15 9605 NP_001035374 15 9605 NP_001035375 15 9605 NP_001268367 15 9605 NP_001264874 15 9605 NP_008933 15 9605 XP_006724234 15 9605 XP_005261462 15 9605 XP_005260314 15 9605 XP_006721308 15 9605 XP_005256149 15 9605 XP_006711818 15 9605 XP_006711817 15 9605>NP_001275701 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSSNQYLIQ 9 KSSN YLIQ Sbjct: 1257 KSSNLYLIQ 1265>NP_004561 Length = 1445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSSNQYLIQ 9 KSSN YLIQ Sbjct: 1216 KSSNLYLIQ 1224>NP_001275703 Length = 1264 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSSNQYLIQ 9 KSSN YLIQ Sbjct: 1035 KSSNLYLIQ 1043>XP_005253450 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSSNQYLIQ 9 KSSN YLIQ Sbjct: 1257 KSSNLYLIQ 1265>XP_006719151 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KSSNQYLIQ 9 KSSN YLIQ Sbjct: 1257 KSSNLYLIQ 1265>XP_005270863 Length = 391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_005270862 Length = 431 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_006710667 Length = 446 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_006710666 Length = 446 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>NP_001139108 Length = 440 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>NP_775105 Length = 1659 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>NP_001036148 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>NP_001182005 Length = 198 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KSSNQYLIQ 9 KSS QYL Q Sbjct: 45 KSSKQYLRQ 53>XP_006723251 Length = 198 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KSSNQYLIQ 9 KSS QYL Q Sbjct: 45 KSSKQYLRQ 53>XP_006715506 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>XP_006715505 Length = 1673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>XP_006715504 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>XP_006715503 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>XP_006715502 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSSNQYLI 8 +SSNQ+LI Sbjct: 144 ESSNQFLI 151>XP_005264359 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSSNQYLIQ 9 K NQ+LIQ Sbjct: 840 KPQNQFLIQ 848>NP_001073943 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSSNQYLIQ 9 K NQ+LIQ Sbjct: 840 KPQNQFLIQ 848>NP_733936 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SNQYLIQ 9 SNQ+L+Q Sbjct: 356 SNQFLVQ 362>NP_001071 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SNQYLIQ 9 SNQ+L+Q Sbjct: 343 SNQFLVQ 349>NP_065795 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_001190187 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_001032 Length = 1827 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSSNQYL 7 KSS QYL Sbjct: 683 KSSRQYL 689>NP_644814 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSSNQYL 7 KSS QYL Sbjct: 25 KSSEQYL 31>NP_056178 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_001139799 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_001139798 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_004680 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_542172 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SNQYLI 8 SNQYL+ Sbjct: 272 SNQYLV 277>XP_006721859 Length = 844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSSNQYL 7 KSS QYL Sbjct: 25 KSSEQYL 31>XP_005247225 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSSNQYLI 8 K NQYLI Sbjct: 395 KIKNQYLI 402>XP_005247224 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSSNQYLI 8 K NQYLI Sbjct: 395 KIKNQYLI 402>XP_005264515 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YLI+ Sbjct: 18 SSNPYLIR 25>XP_005264513 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_997218 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSSNQYLI 8 K NQYLI Sbjct: 395 KIKNQYLI 402>NP_001138890 Length = 2481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN+YL + Sbjct: 1441 SSNEYLYE 1448>NP_036221 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 + N+YL+Q Sbjct: 666 AENEYLVQ 673>NP_001264880 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264876 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264878 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_783163 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_001099022 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099021 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099020 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099019 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_036408 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSSNQYLI 8 +SSN YL+ Sbjct: 399 RSSNPYLL 406>NP_001268366 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_004730 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN YL++ Sbjct: 18 SSNPYLVR 25>NP_001264881 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264877 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264875 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_060770 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001035374 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KSSNQY 6 KS+NQY Sbjct: 674 KSNNQY 679>NP_001035375 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KSSNQY 6 KS+NQY Sbjct: 627 KSNNQY 632>NP_001268367 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_001264874 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SSNQYLIQ 9 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_008933 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 +SN+YL++ Sbjct: 18 ASNKYLVE 25>XP_006724234 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN+YL + Sbjct: 1323 SSNEYLYE 1330>XP_005261462 Length = 2473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 SSN+YL + Sbjct: 1441 SSNEYLYE 1448>XP_005260314 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SSNQYLIQ 9 +SN+YL++ Sbjct: 18 ASNKYLVE 25>XP_006721308 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KSSNQY 6 KS+NQY Sbjct: 642 KSNNQY 647>XP_005256149 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KSSNQY 6 KS+NQY Sbjct: 689 KSNNQY 694>XP_006711818 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 + N+YL+Q Sbjct: 487 AENEYLVQ 494>XP_006711817 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SSNQYLIQ 9 + N+YL+Q Sbjct: 487 AENEYLVQ 494Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.117 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,992 Number of extensions: 583 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |