Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006726897                                                           18    1482
XP_006724471                                                           18    1482
XP_006710181                                                           18    1482
NP_001185761                                                           18    1935
NP_001185763                                                           18    1935
NP_055459                                                              18    1935
XP_006726410                                                           18    1935
XP_006711719                                                           18    1935
XP_006711718                                                           18    1935
XP_006711717                                                           18    1935
XP_006711716                                                           18    1935
XP_006711715                                                           18    1935
XP_006711714                                                           18    1935
XP_006711713                                                           18    1935
XP_006711712                                                           18    1935
XP_006711711                                                           18    1935
XP_006711710                                                           18    1935
XP_006711709                                                           18    1935
XP_005277503                                                           18    1935
XP_005273038                                                           18    1935
XP_006711708                                                           18    1935
XP_005277500                                                           18    1935
XP_006711707                                                           18    1935
XP_005277499                                                           18    1935
XP_006711706                                                           18    1935
XP_006711705                                                           18    1935
XP_006711164                                                           18    1935
XP_006710143                                                           18    1935
XP_006710142                                                           18    1935
XP_006710141                                                           18    1935
NP_115811                                                              17    2528
NP_078911                                                              17    4312
XP_005257087                                                           17    4312
XP_005257086                                                           17    4312
XP_006718648                                                           17    4312
XP_005252185                                                           17    4312
XP_006717294                                                           17    4312
XP_005252184                                                           17    4312
XP_005252183                                                           17    4312
NP_694941                                                              17    4312
NP_001230111                                                           16    5631
NP_000044                                                              16    5631
NP_001005918                                                           16    5631
NP_542416                                                              16    5631
NP_542414                                                              16    5631
NP_006255                                                              16    5631
NP_001099010                                                           16    5631
NP_073613                                                              16    5631
XP_005266488                                                           16    5631
XP_005266489                                                           16    5631
XP_005266487                                                           16    5631
XP_005266486                                                           16    5631
XP_005266485                                                           16    5631
XP_005266484                                                           16    5631
XP_006719900                                                           16    5631
XP_005266480                                                           16    5631
XP_005266481                                                           16    5631
XP_006718417                                                           16    5631
XP_005253237                                                           16    5631
XP_005253236                                                           16    5631
XP_005263224                                                           16    5631
NP_114432                                                              16    7355
NP_001092688                                                           16    7355
NP_065770                                                              16    7355
NP_065810                                                              16    7355
XP_003960359                                                           16    7355
XP_006723741                                                           16    7355
XP_006720684                                                           16    7355
XP_001724294                                                           16    7355
XP_005262682                                                           16    7355
XP_005276177                                                           16    7355
XP_002345622                                                           16    7355
NP_004651                                                              15    9605
NP_001116137                                                           15    9605
NP_001347                                                              15    9605
NP_001180346                                                           15    9605
NP_001180345                                                           15    9605
NP_079521                                                              15    9605
NP_055079                                                              15    9605
NP_001177728                                                           15    9605
NP_001177730                                                           15    9605
NP_004721                                                              15    9605
NP_001243231                                                           15    9605
NP_001269114                                                           15    9605
XP_006724941                                                           15    9605
XP_005262621                                                           15    9605
XP_006724940                                                           15    9605
XP_006722974                                                           15    9605
XP_006722973                                                           15    9605
XP_005271978                                                           15    9605
XP_005271977                                                           15    9605
XP_006714134                                                           15    9605
XP_005262758                                                           15    9605
>XP_006726897
          Length = 313

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  KSRVRPLSV 9
          +SRVRPL V
Sbjct: 59 RSRVRPLEV 67
>XP_006724471
          Length = 313

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  KSRVRPLSV 9
          +SRVRPL V
Sbjct: 59 RSRVRPLEV 67
>XP_006710181
          Length = 313

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  KSRVRPLSV 9
          +SRVRPL V
Sbjct: 59 RSRVRPLEV 67
>NP_001185761
          Length = 2240

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1332 KSRVRSLSV 1340
>NP_001185763
          Length = 2362

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1376 KSRVRSLSV 1384
>NP_055459
          Length = 2346

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1376 KSRVRSLSV 1384
>XP_006726410
          Length = 2087

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1179 KSRVRSLSV 1187
>XP_006711719
          Length = 2302

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1332 KSRVRSLSV 1340
>XP_006711718
          Length = 1436

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KSRVR LSV
Sbjct: 383 KSRVRSLSV 391
>XP_006711717
          Length = 2385

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1332 KSRVRSLSV 1340
>XP_006711716
          Length = 2411

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1441 KSRVRSLSV 1449
>XP_006711715
          Length = 2428

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1375 KSRVRSLSV 1383
>XP_006711714
          Length = 2429

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1376 KSRVRSLSV 1384
>XP_006711713
          Length = 2432

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1379 KSRVRSLSV 1387
>XP_006711712
          Length = 2473

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_006711711
          Length = 2482

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1429 KSRVRSLSV 1437
>XP_006711710
          Length = 2494

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1441 KSRVRSLSV 1449
>XP_006711709
          Length = 2495

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1442 KSRVRSLSV 1450
>XP_005277503
          Length = 2498

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_005273038
          Length = 2509

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_006711708
          Length = 2512

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_005277500
          Length = 2525

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_006711707
          Length = 2553

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_005277499
          Length = 2561

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_006711706
          Length = 2591

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1538 KSRVRSLSV 1546
>XP_006711705
          Length = 2592

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1539 KSRVRSLSV 1547
>XP_006711164
          Length = 2087

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    KSRVRPLSV 9
            KSRVR LSV
Sbjct: 1179 KSRVRSLSV 1187
>XP_006710143
          Length = 562

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KSRVR LSV
Sbjct: 218 KSRVRSLSV 226
>XP_006710142
          Length = 671

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KSRVR LSV
Sbjct: 327 KSRVRSLSV 335
>XP_006710141
          Length = 672

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KSRVR LSV
Sbjct: 328 KSRVRSLSV 336
>NP_115811
          Length = 1036

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K R+RPLS
Sbjct: 607 KERIRPLS 614
>NP_078911
          Length = 725

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K +VRPLS
Sbjct: 566 KKKVRPLS 573
>XP_005257087
          Length = 957

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  RVRPLSV 9
          RVRP+SV
Sbjct: 17 RVRPISV 23
>XP_005257086
          Length = 999

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  RVRPLSV 9
          RVRP+SV
Sbjct: 17 RVRPISV 23
>XP_006718648
          Length = 177

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   KSRVRPLS 8
           +S+VRPLS
Sbjct: 129 QSKVRPLS 136
>XP_005252185
          Length = 569

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K +VRPLS
Sbjct: 410 KKKVRPLS 417
>XP_006717294
          Length = 692

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K +VRPLS
Sbjct: 533 KKKVRPLS 540
>XP_005252184
          Length = 725

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K +VRPLS
Sbjct: 566 KKKVRPLS 573
>XP_005252183
          Length = 725

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K +VRPLS
Sbjct: 566 KKKVRPLS 573
>NP_694941
          Length = 998

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  RVRPLSV 9
          RVRP+SV
Sbjct: 17 RVRPISV 23
>NP_001230111
          Length = 1354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>NP_000044
          Length = 1465

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>NP_001005918
          Length = 1258

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>NP_542416
          Length = 2490

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K  VRPLSV
Sbjct: 919 KLAVRPLSV 927
>NP_542414
          Length = 2485

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K  VRPLSV
Sbjct: 919 KLAVRPLSV 927
>NP_006255
          Length = 2466

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K  VRPLSV
Sbjct: 919 KLAVRPLSV 927
>NP_001099010
          Length = 1117

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SRVRPLS 8
           +RVRPLS
Sbjct: 215 TRVRPLS 221
>NP_073613
          Length = 747

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   KSRVRPL 7
           K RVRPL
Sbjct: 660 KKRVRPL 666
>XP_005266488
          Length = 1453

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 199 KSKVAPLSL 207
>XP_005266489
          Length = 1303

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>XP_005266487
          Length = 1465

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>XP_005266486
          Length = 1355

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>XP_005266485
          Length = 1381

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>XP_005266484
          Length = 1387

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 211 KSKVAPLSL 219
>XP_006719900
          Length = 1433

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 179 KSKVAPLSL 187
>XP_005266480
          Length = 1433

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 179 KSKVAPLSL 187
>XP_005266481
          Length = 1433

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KSRVRPLSV 9
           KS+V PLS+
Sbjct: 179 KSKVAPLSL 187
>XP_006718417
          Length = 1118

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SRVRPLS 8
           +RVRPLS
Sbjct: 215 TRVRPLS 221
>XP_005253237
          Length = 1160

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SRVRPLS 8
           +RVRPLS
Sbjct: 258 TRVRPLS 264
>XP_005253236
          Length = 1161

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SRVRPLS 8
           +RVRPLS
Sbjct: 258 TRVRPLS 264
>XP_005263224
          Length = 2491

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K  VRPLSV
Sbjct: 925 KLAVRPLSV 933
>NP_114432
          Length = 1249

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   KSRVRPL 7
           K R+RPL
Sbjct: 158 KKRIRPL 164
>NP_001092688
          Length = 1159

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    SRVRPL 7
            SRVRPL
Sbjct: 1118 SRVRPL 1123
>NP_065770
          Length = 2036

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KSRVRPLSV 9
            + R+RPL V
Sbjct: 1173 RPRIRPLEV 1181
>NP_065810
          Length = 4700

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3  RVRPLS 8
          RVRPLS
Sbjct: 9  RVRPLS 14
>XP_003960359
          Length = 589

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          K R+R LSV
Sbjct: 77 KQRIRDLSV 85
>XP_006723741
          Length = 643

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K R+R LSV
Sbjct: 146 KQRIRDLSV 154
>XP_006720684
          Length = 4713

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3  RVRPLS 8
          RVRPLS
Sbjct: 9  RVRPLS 14
>XP_001724294
          Length = 589

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          K R+R LSV
Sbjct: 77 KQRIRDLSV 85
>XP_005262682
          Length = 1150

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    SRVRPL 7
            SRVRPL
Sbjct: 1109 SRVRPL 1114
>XP_005276177
          Length = 643

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K R+R LSV
Sbjct: 146 KQRIRDLSV 154
>XP_002345622
          Length = 613

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           K R+R LSV
Sbjct: 101 KQRIRDLSV 109
>NP_004651
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 290 RSRVRPCVV 298
>NP_001116137
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 290 RSRVRPCVV 298
>NP_001347
          Length = 662

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 292 RSRVRPCVV 300
>NP_001180346
          Length = 646

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 276 RSRVRPCVV 284
>NP_001180345
          Length = 661

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 292 RSRVRPCVV 300
>NP_079521
          Length = 374

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   KSRVRPLS 8
           +SR+RP+S
Sbjct: 163 QSRMRPVS 170
>NP_055079
          Length = 970

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K+RV+P S
Sbjct: 102 KNRVKPFS 109
>NP_001177728
          Length = 938

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KSRVRPLS 8
          K+RV+P S
Sbjct: 70 KNRVKPFS 77
>NP_001177730
          Length = 929

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KSRVRPLS 8
          K+RV+P S
Sbjct: 61 KNRVKPFS 68
>NP_004721
          Length = 437

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          KSRV  LSV
Sbjct: 63 KSRVNRLSV 71
>NP_001243231
          Length = 404

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          KSRV  LSV
Sbjct: 30 KSRVNRLSV 38
>NP_001269114
          Length = 423

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          KSRV  LSV
Sbjct: 49 KSRVNRLSV 57
>XP_006724941
          Length = 637

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 290 RSRVRPCVV 298
>XP_005262621
          Length = 657

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 287 RSRVRPCVV 295
>XP_006724940
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KSRVRPLSV 9
           +SRVRP  V
Sbjct: 290 RSRVRPCVV 298
>XP_006722974
          Length = 288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  KSRVRPLS 8
          +SR+RP+S
Sbjct: 77 QSRMRPVS 84
>XP_006722973
          Length = 326

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   KSRVRPLS 8
           +SR+RP+S
Sbjct: 115 QSRMRPVS 122
>XP_005271978
          Length = 404

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          KSRV  LSV
Sbjct: 30 KSRVNRLSV 38
>XP_005271977
          Length = 404

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KSRVRPLSV 9
          KSRV  LSV
Sbjct: 30 KSRVNRLSV 38
>XP_006714134
          Length = 923

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KSRVRPLS 8
          K+RV+P S
Sbjct: 55 KNRVKPFS 62
>XP_005262758
          Length = 936

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   KSRVRPLS 8
           K+RV+P S
Sbjct: 102 KNRVKPFS 109
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.319    0.130    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 548,573
Number of extensions: 786
Number of successful extensions: 93
Number of sequences better than 10000.0: 93
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 93
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package