Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057323 17 4312 XP_005256732 17 4312 NP_001273479 16 5631 NP_001007528 16 5631 NP_001139017 16 5631 NP_004447 16 7355 NP_694543 16 7355 NP_001190177 16 7355 NP_001190178 16 7355 NP_001190176 16 7355 NP_008919 16 7355 NP_055928 16 7355 NP_733751 16 7355 NP_055504 16 7355 NP_001277192 16 7355 NP_056169 16 7355 NP_055626 16 7355 NP_055160 16 7355 XP_005256618 16 7355 XP_005256617 16 7355 XP_006717405 16 7355 XP_006717404 16 7355 XP_006717403 16 7355 XP_005263469 16 7355 XP_005263468 16 7355 XP_006716142 16 7355 XP_005250088 16 7355 XP_006716141 16 7355 XP_005250085 16 7355 XP_006716140 16 7355 XP_005250084 16 7355 XP_005250083 16 7355 XP_005250082 16 7355 XP_005250021 16 7355 XP_006715950 16 7355 XP_006715948 16 7355 XP_005250020 16 7355 XP_006715946 16 7355 XP_005250019 16 7355 XP_006715469 16 7355 XP_005266931 16 7355 XP_006712687 16 7355 XP_006712686 16 7355 XP_006712685 16 7355 XP_006712684 16 7355 XP_006712683 16 7355 XP_006712682 16 7355 XP_006712681 16 7355 XP_005246730 16 7355 XP_005246729 16 7355 XP_006712680 16 7355 XP_006712679 16 7355 NP_073592 15 9605 NP_853514 15 9605 NP_004648 15 9605 XP_006718102 15 9605 XP_006717298 15 9605>NP_057323 Length = 3530 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVSSHRQ 9 +LVS HRQ Sbjct: 3383 NLVSQHRQ 3390>XP_005256732 Length = 3531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVSSHRQ 9 +LVS HRQ Sbjct: 3384 NLVSQHRQ 3391>NP_001273479 Length = 153 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVSSHRQ 9 SLVS+H Q Sbjct: 90 SLVSAHNQ 97>NP_001007528 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KSLV H+Q Sbjct: 304 KSLVKLHKQ 312>NP_001139017 Length = 154 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLVSSHRQ 9 SLV SHR+ Sbjct: 101 SLVGSHRR 108>NP_004447 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>NP_694543 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>NP_001190177 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>NP_001190178 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>NP_001190176 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>NP_008919 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSLVSSHR 8 K VSSHR Sbjct: 251 KRFVSSHR 258>NP_055928 Length = 2961 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSLVSSHR 8 +SLVS HR Sbjct: 70 ESLVSRHR 77>NP_733751 Length = 4911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4126 LVSSHR 4131>NP_055504 Length = 2186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1601 KSIVRSHLQ 1609>NP_001277192 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1595 KSIVRSHLQ 1603>NP_056169 Length = 1749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 K LVS +RQ Sbjct: 167 KELVSKYRQ 175>NP_055626 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>NP_055160 Length = 2279 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSLVSSHR 8 +S VSSHR Sbjct: 7 RSSVSSHR 14>XP_005256618 Length = 2962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSLVSSHR 8 +SLVS HR Sbjct: 70 ESLVSRHR 77>XP_005256617 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSLVSSHR 8 +SLVS HR Sbjct: 70 ESLVSRHR 77>XP_006717405 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>XP_006717404 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>XP_006717403 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>XP_005263469 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>XP_005263468 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL+ SH++ Sbjct: 261 KSLLKSHQE 269>XP_006716142 Length = 4927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4142 LVSSHR 4147>XP_005250088 Length = 4928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4143 LVSSHR 4148>XP_006716141 Length = 4959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4174 LVSSHR 4179>XP_005250085 Length = 4979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_006716140 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250084 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250083 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250082 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVSSHR 8 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_005250021 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 47 KSMFSSNRQ 55>XP_006715950 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 47 KSMFSSNRQ 55>XP_006715948 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>XP_005250020 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 47 KSMFSSNRQ 55>XP_006715946 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 39 KSMFSSNRQ 47>XP_005250019 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KS+ SS+RQ Sbjct: 47 KSMFSSNRQ 55>XP_006715469 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVSSHRQ 9 SL+SSH++ Sbjct: 71 SLISSHQR 78>XP_005266931 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLVSSHRQ 9 SL+SSH++ Sbjct: 119 SLISSHQR 126>XP_006712687 Length = 2166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1605 KSIVRSHLQ 1613>XP_006712686 Length = 2173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_006712685 Length = 2175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_006712684 Length = 2189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1595 KSIVRSHLQ 1603>XP_006712683 Length = 2195 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1601 KSIVRSHLQ 1609>XP_006712682 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1605 KSIVRSHLQ 1613>XP_006712681 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_005246730 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_005246729 Length = 2201 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_006712680 Length = 2206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>XP_006712679 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KS+V SH Q Sbjct: 1614 KSIVRSHLQ 1622>NP_073592 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KSLV +H Q Sbjct: 19 KSLVVAHAQ 27>NP_853514 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SLVSSH 7 SLVSSH Sbjct: 1042 SLVSSH 1047>NP_004648 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLVSSHRQ 9 KSL S+H++ Sbjct: 273 KSLTSNHQK 281>XP_006718102 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 K+ VSSH Q Sbjct: 826 KAKVSSHSQ 834>XP_006717298 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLVSSHRQ 9 KSLV +H Q Sbjct: 19 KSLVVAHAQ 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.111 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 552,853 Number of extensions: 878 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |