Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_003791 17 4312 NP_001273357 17 4312 NP_001273355 17 4312 XP_006715652 17 4312 NP_004483 16 5631 NP_001034975 16 5631 NP_064544 16 5631 NP_001241878 16 5631 XP_005258965 16 5631 XP_005258966 16 5631 XP_005258964 16 5631 XP_005258963 16 5631 XP_005254381 16 5631 XP_005254382 16 5631 NP_001025180 16 7355 NP_001010 16 7355 NP_001842 15 9605 NP_003551 15 9605 NP_000771 15 9605 NP_001078823 15 9605 NP_055696 15 9605 NP_115667 15 9605 NP_078933 15 9605 NP_001258745 15 9605 NP_001001850 15 9605 XP_006724755 15 9605 XP_006724754 15 9605 XP_005262247 15 9605 XP_006724395 15 9605 XP_005261823 15 9605 XP_005261822 15 9605 XP_005261821 15 9605 XP_006718153 15 9605 XP_005247513 15 9605 XP_005247512 15 9605 XP_005271327 15 9605 XP_005271326 15 9605 XP_006711037 15 9605 XP_005271325 15 9605 XP_006711036 15 9605 XP_006711035 15 9605 XP_006711034 15 9605 XP_005271323 15 9605 XP_006711032 15 9605 XP_006711031 15 9605 XP_006711030 15 9605 XP_006711029 15 9605 XP_005271322 15 9605 XP_006711028 15 9605 XP_006711027 15 9605 XP_006711026 15 9605 XP_005271321 15 9605 XP_006711025 15 9605 XP_006711024 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSLNNIEFR 9 KSLN+IEFR Sbjct: 71 KSLNSIEFR 79>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSLNNIEFR 9 KSLN+IEFR Sbjct: 71 KSLNSIEFR 79>NP_003791 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLNNIEFR 9 SLN+++FR Sbjct: 463 SLNSVDFR 470>NP_001273357 Length = 514 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLNNIEFR 9 SLN+++FR Sbjct: 380 SLNSVDFR 387>NP_001273355 Length = 574 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLNNIEFR 9 SLN+++FR Sbjct: 440 SLNSVDFR 447>XP_006715652 Length = 574 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SLNNIEFR 9 SLN+++FR Sbjct: 440 SLNSVDFR 447>NP_004483 Length = 109 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNNIEFR 9 LN++EFR Sbjct: 76 LNDVEFR 82>NP_001034975 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLNNIEFR 9 K ++NIEF+ Sbjct: 108 KEIHNIEFQ 116>NP_064544 Length = 1026 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSLNNIE 7 KS+NN+E Sbjct: 760 KSINNLE 766>NP_001241878 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSLNNIE 7 KS+NN+E Sbjct: 330 KSINNLE 336>XP_005258965 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLNNIEFR 9 K ++NIEF+ Sbjct: 39 KEIHNIEFQ 47>XP_005258966 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLNNIEFR 9 K ++NIEF+ Sbjct: 39 KEIHNIEFQ 47>XP_005258964 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLNNIEFR 9 K ++NIEF+ Sbjct: 108 KEIHNIEFQ 116>XP_005258963 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSLNNIEFR 9 K ++NIEF+ Sbjct: 108 KEIHNIEFQ 116>XP_005254381 Length = 109 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNNIEFR 9 LN++EFR Sbjct: 76 LNDVEFR 82>XP_005254382 Length = 109 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNNIEFR 9 LN++EFR Sbjct: 76 LNDVEFR 82>NP_001025180 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLNNIEFR 9 KS+NN E R Sbjct: 12 KSINNAEKR 20>NP_001010 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSLNNIEFR 9 KS+NN E R Sbjct: 12 KSINNAEKR 20>NP_001842 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NNIEFR 9 NN++FR Sbjct: 91 NNVDFR 96>NP_003551 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLNNIEFR 9 SLNN+E + Sbjct: 445 SLNNLELQ 452>NP_000771 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNNIEFR 9 LN+IEF+ Sbjct: 492 LNDIEFK 498>NP_001078823 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSLNNIEF 8 KSL N+E+ Sbjct: 297 KSLANVEY 304>NP_055696 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KSLNNIEF 8 KSL+++EF Sbjct: 605 KSLSDLEF 612>NP_115667 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 719 ALNNVQF 725>NP_078933 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSLNNIEF 8 KSL N+E+ Sbjct: 297 KSLANVEY 304>NP_001258745 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KSLNNIEF 8 KSL+++EF Sbjct: 605 KSLSDLEF 612>NP_001001850 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSLNNIE 7 +S+NNIE Sbjct: 245 ESINNIE 251>XP_006724755 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSLNNIEF 8 KSL N+E+ Sbjct: 297 KSLANVEY 304>XP_006724754 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSLNNIEF 8 KSL N+E+ Sbjct: 175 KSLANVEY 182>XP_005262247 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSLNNIEF 8 KSL N+E+ Sbjct: 205 KSLANVEY 212>XP_006724395 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLNNIEFR 9 SLNN+E + Sbjct: 445 SLNNLELQ 452>XP_005261823 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLNNIEFR 9 SLNN+E + Sbjct: 445 SLNNLELQ 452>XP_005261822 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLNNIEFR 9 SLNN+E + Sbjct: 445 SLNNLELQ 452>XP_005261821 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLNNIEFR 9 SLNN+E + Sbjct: 445 SLNNLELQ 452>XP_006718153 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KSLNNIEF 8 KSL+++EF Sbjct: 605 KSLSDLEF 612>XP_005247513 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSLNNIE 7 +S+NNIE Sbjct: 245 ESINNIE 251>XP_005247512 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KSLNNIE 7 +S+NNIE Sbjct: 245 ESINNIE 251>XP_005271327 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 520 ALNNVQF 526>XP_005271326 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 522 ALNNVQF 528>XP_006711037 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 522 ALNNVQF 528>XP_005271325 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 528 ALNNVQF 534>XP_006711036 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 550 ALNNVQF 556>XP_006711035 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 556 ALNNVQF 562>XP_006711034 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 558 ALNNVQF 564>XP_005271323 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 689 ALNNVQF 695>XP_006711032 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 695 ALNNVQF 701>XP_006711031 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 697 ALNNVQF 703>XP_006711030 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 699 ALNNVQF 705>XP_006711029 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 703 ALNNVQF 709>XP_005271322 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 713 ALNNVQF 719>XP_006711028 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 717 ALNNVQF 723>XP_006711027 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 721 ALNNVQF 727>XP_006711026 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 721 ALNNVQF 727>XP_005271321 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 723 ALNNVQF 729>XP_006711025 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 725 ALNNVQF 731>XP_006711024 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SLNNIEF 8 +LNN++F Sbjct: 725 ALNNVQF 731Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.135 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,784 Number of extensions: 602 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |