Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 869 NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 NP_001094891 18 1482 NP_004320 18 1935 NP_004882 18 1935 NP_001124388 17 2528 NP_004603 17 2528 NP_001104537 17 2528 NP_001096 17 2528 NP_001104502 17 2528 NP_660302 17 2528 NP_001104501 17 2528 NP_001104503 17 2528 NP_001243721 17 2528 NP_001243722 17 2528 NP_001243723 17 2528 NP_001194 17 2528 NP_001004441 17 2528 NP_064732 17 2528 NP_001607 17 2528 NP_001097 17 2528 NP_004293 17 2528 NP_064733 17 2528 NP_001265509 17 2528 NP_001265508 17 2528 XP_006719748 17 2528 XP_005252207 17 2528 XP_006714662 17 2528 XP_006714355 17 2528 XP_005265640 17 2528 XP_005263900 17 2528 XP_006712888 17 2528 XP_005246996 17 2528 XP_005246997 17 2528 NP_996888 17 3301 NP_009053 17 3301 NP_001263302 17 3301 NP_659469 17 4312 NP_001104508 17 4312 NP_001274079 17 4312 XP_005250270 17 4312 XP_005250269 17 4312 XP_005250266 17 4312 XP_006715960 17 4312 XP_005250265 17 4312 XP_005250264 17 4312 XP_005250262 17 4312 NP_006276 16 7355 NP_954984 15 9605 NP_001157755 15 9605 NP_001106674 15 9605 NP_001106673 15 9605 NP_679211 15 9605 NP_001157753 15 9605 NP_620636 15 9605 NP_003062 15 9605 NP_001139806 15 9605 XP_006719484 15 9605 XP_006719483 15 9605 XP_006719482 15 9605 XP_006719481 15 9605 XP_006719480 15 9605 XP_006719479 15 9605 XP_006719478 15 9605 XP_006719477 15 9605 XP_006719476 15 9605 XP_006719475 15 9605 XP_006715737 15 9605 XP_006715382 15 9605 XP_005247781 15 9605>NP_001243398 Length = 1781 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNILLR Sbjct: 467 KSKNILLR 474>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNILLR Sbjct: 759 KSKNILLR 766>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNILLR Sbjct: 576 KSKNILLR 583>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNILLR Sbjct: 759 KSKNILLR 766>NP_001094891 Length = 1022 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNI+LR Sbjct: 536 KSKNIILR 543>NP_004320 Length = 532 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 364 KSKNILIKK 372>NP_004882 Length = 65 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKNIL+R Sbjct: 12 KSKNILVR 19>NP_001124388 Length = 426 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 258 KSKNILVKK 266>NP_004603 Length = 503 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 335 KSKNILVKK 343>NP_001104537 Length = 509 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 338 KSKNILVKK 346>NP_001096 Length = 509 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 338 KSKNILVKK 346>NP_001104502 Length = 413 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 245 KSKNILVKK 253>NP_660302 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 325 KSKNILVKK 333>NP_001104501 Length = 443 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 275 KSKNILVKK 283>NP_001104503 Length = 336 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 168 KSKNILVKK 176>NP_001243721 Length = 502 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 334 KSKNILVKK 342>NP_001243722 Length = 532 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 364 KSKNILVKK 372>NP_001243723 Length = 502 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 334 KSKNILVKK 342>NP_001194 Length = 502 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 334 KSKNILVKK 342>NP_001004441 Length = 514 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSKNILLRR 9 KSK +LLRR Sbjct: 492 KSKKMLLRR 500>NP_064732 Length = 453 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 285 KSKNILVKK 293>NP_001607 Length = 513 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 324 KSKNVLLK 331>NP_001097 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 323 KSKNVLLK 330>NP_004293 Length = 505 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 337 KSKNILVKK 345>NP_064733 Length = 546 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 378 KSKNILVKK 386>NP_001265509 Length = 405 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 216 KSKNVLLK 223>NP_001265508 Length = 513 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 324 KSKNVLLK 331>XP_006719748 Length = 545 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 377 KSKNILVKK 385>XP_005252207 Length = 507 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 339 KSKNILVKK 347>XP_006714662 Length = 514 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KSKNILLRR 9 KSK +LLRR Sbjct: 492 KSKKMLLRR 500>XP_006714355 Length = 502 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 334 KSKNILVKK 342>XP_005265640 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 344 KSKNVLLK 351>XP_005263900 Length = 361 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 KSKN+LL+ Sbjct: 324 KSKNVLLK 331>XP_006712888 Length = 509 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 338 KSKNILVKK 346>XP_005246996 Length = 509 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 338 KSKNILVKK 346>XP_005246997 Length = 509 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KSKNILLRR 9 KSKNIL+++ Sbjct: 338 KSKNILVKK 346>NP_996888 Length = 251 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 K+KN+LLR Sbjct: 227 KNKNLLLR 234>NP_009053 Length = 310 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 K+KN+LLR Sbjct: 286 KNKNLLLR 293>NP_001263302 Length = 310 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 KSKNILLR 8 K+KN+LLR Sbjct: 286 KNKNLLLR 293>NP_659469 Length = 735 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 70 KLKNILLR 77>NP_001104508 Length = 690 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 70 KLKNILLR 77>NP_001274079 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 70 KLKNILLR 77>XP_005250270 Length = 453 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 70 KLKNILLR 77>XP_005250269 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 160 KLKNILLR 167>XP_005250266 Length = 735 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 70 KLKNILLR 77>XP_006715960 Length = 737 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 72 KLKNILLR 79>XP_005250265 Length = 780 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 160 KLKNILLR 167>XP_005250264 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 160 KLKNILLR 167>XP_005250262 Length = 825 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KSKNILLR 8 K KNILLR Sbjct: 160 KLKNILLR 167>NP_006276 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKNILLRR 9 SKN L+RR Sbjct: 178 SKNCLVRR 185>NP_954984 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>NP_001157755 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KNILLR 8 KNILLR Sbjct: 81 KNILLR 86>NP_001106674 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 808 KSKNIL 813>NP_001106673 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>NP_679211 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KNILLR 8 KNILLR Sbjct: 537 KNILLR 542>NP_001157753 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KNILLR 8 KNILLR Sbjct: 536 KNILLR 541>NP_620636 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KNILLRR 9 KNI LRR Sbjct: 638 KNITLRR 644>NP_003062 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KNILLRR 9 KNI LRR Sbjct: 638 KNITLRR 644>NP_001139806 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1439 KSKNIL 1444>XP_006719484 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>XP_006719483 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>XP_006719482 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>XP_006719481 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 98 KSKNIL 103>XP_006719480 Length = 2035 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1914 KSKNIL 1919>XP_006719479 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1938 KSKNIL 1943>XP_006719478 Length = 2078 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1961 KSKNIL 1966>XP_006719477 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1961 KSKNIL 1966>XP_006719476 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1961 KSKNIL 1966>XP_006719475 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1961 KSKNIL 1966>XP_006715737 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KSKNIL 6 KSKNIL Sbjct: 1226 KSKNIL 1231>XP_006715382 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KNILLR 8 KNILLR Sbjct: 81 KNILLR 86>XP_005247781 Length = 1008 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KNILLRR 9 KNI LRR Sbjct: 637 KNITLRR 643Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.139 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 448,037 Number of extensions: 867 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |