Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001156863 16 5631 NP_653294 16 5631 XP_005259813 16 5631 XP_005259812 16 5631 XP_006715347 16 5631 XP_006715346 16 5631 XP_006715345 16 5631 NP_001254708 16 7355 NP_001180481 16 7355 NP_001273424 16 7355 NP_062546 16 7355 XP_006723248 16 7355 XP_005258914 16 7355 XP_005258915 16 7355 XP_006720675 16 7355 XP_006720674 16 7355 XP_006720672 16 7355 XP_005254605 16 7355 XP_005254604 16 7355 XP_005249007 16 7355 NP_001012458 16 7355 NP_001073991 15 9605 NP_000099 15 9605 NP_001276680 15 9605 NP_001276679 15 9605 NP_001276681 15 9605 NP_001136279 15 9605 NP_859074 15 9605 NP_071904 15 9605 NP_001803 15 9605 XP_005266561 15 9605 XP_005266560 15 9605 XP_005266559 15 9605 XP_005273535 15 9605 XP_006716393 15 9605 XP_006716392 15 9605 XP_006716391 15 9605 XP_005273534 15 9605 XP_006714128 15 9605 XP_006714127 15 9605 XP_005248234 15 9605>NP_001156863 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RSI+ Sbjct: 393 KSFSRRSIL 401>NP_653294 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+SRS + Sbjct: 187 KSFSSRSYL 195>XP_005259813 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+SRS + Sbjct: 116 KSFSSRSYL 124>XP_005259812 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+SRS + Sbjct: 187 KSFSSRSYL 195>XP_006715347 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RSI+ Sbjct: 393 KSFSRRSIL 401>XP_006715346 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RSI+ Sbjct: 393 KSFSRRSIL 401>XP_006715345 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RSI+ Sbjct: 393 KSFSRRSIL 401>NP_001254708 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 536 KSFTSRSAL 544Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 816 KSFTSRSTL 824>NP_001180481 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 568 KSFTSRSAL 576Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 848 KSFTSRSTL 856>NP_001273424 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 848 KSFSSRS 854>NP_062546 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_006723248 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 538 KSFTSRSAL 546Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 818 KSFTSRSTL 826>XP_005258914 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 570 KSFTSRSAL 578Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 850 KSFTSRSTL 858>XP_005258915 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 570 KSFTSRSAL 578Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSFASRSIM 9 KSF SRS + Sbjct: 850 KSFTSRSTL 858>XP_006720675 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720674 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720672 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254605 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254604 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005249007 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RS++ Sbjct: 340 KSFSRRSVL 348>NP_001012458 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 KSF+ RS++ Sbjct: 340 KSFSRRSVL 348>NP_001073991 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSFASRSI 8 KSF SRS+ Sbjct: 1463 KSFFSRSL 1470>NP_000099 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSFASRSI 8 K FASR I Sbjct: 104 KDFASRGI 111>NP_001276680 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSFASRSI 8 K FASR I Sbjct: 81 KDFASRGI 88>NP_001276679 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSFASRSI 8 K FASR I Sbjct: 5 KDFASRGI 12>NP_001276681 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSFASRSI 8 K FASR I Sbjct: 104 KDFASRGI 111>NP_001136279 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSFASRSIM 9 K+F SRS++ Sbjct: 30 KNFVSRSLV 38>NP_859074 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 447 NFASRSI 453>NP_071904 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSFASRS 7 K FASRS Sbjct: 731 KQFASRS 737>NP_001803 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 +SFASRS Sbjct: 310 QSFASRS 316>XP_005266561 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSFASRS 7 K FASRS Sbjct: 441 KQFASRS 447>XP_005266560 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSFASRS 7 K FASRS Sbjct: 731 KQFASRS 737>XP_005266559 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KSFASRS 7 K FASRS Sbjct: 657 KQFASRS 663>XP_005273535 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 271 NFASRSI 277>XP_006716393 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 324 NFASRSI 330>XP_006716392 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 402 NFASRSI 408>XP_006716391 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 415 NFASRSI 421>XP_005273534 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SFASRSI 8 +FASRSI Sbjct: 434 NFASRSI 440>XP_006714128 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 +SFASRS Sbjct: 97 QSFASRS 103>XP_006714127 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSFASRS 7 +SFASRS Sbjct: 310 QSFASRS 316>XP_005248234 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KSFASRSI 8 KSF SRS+ Sbjct: 1463 KSFFSRSL 1470Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.120 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 270,414 Number of extensions: 512 Number of successful extensions: 46 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |