Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002515 20 299 NP_596870 17 4312 NP_056089 17 4312 NP_001004467 16 5631 NP_001275971 16 7355 NP_001275969 16 7355 NP_001275973 16 7355 NP_001275966 16 7355 NP_001275976 16 7355 NP_001275975 16 7355 NP_001275970 16 7355 NP_001275978 16 7355 NP_001275977 16 7355 NP_001275968 16 7355 NP_001275972 16 7355 NP_001275967 16 7355 NP_001275974 16 7355 NP_001074425 16 7355 NP_006709 16 7355 NP_001074424 16 7355 NP_001074422 16 7355 NP_001074423 16 7355 NP_001074420 16 7355 NP_001074421 16 7355 NP_002647 16 7355 NP_061916 16 7355 XP_006717514 16 7355 NP_219482 15 9605 NP_037517 15 9605 NP_071379 15 9605 XP_005260849 15 9605 NP_942093 15 9605>NP_002515 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSFANINLY 9 KSFA+INLY Sbjct: 88 KSFADINLY 96>NP_596870 Length = 5604 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KSFANINL 8 KSFAN+++ Sbjct: 5265 KSFANVDI 5272>NP_056089 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ANINLY 9 ANINLY Sbjct: 257 ANINLY 262>NP_001004467 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFANINLY 9 SFA IN+Y Sbjct: 322 SFAFINMY 329>NP_001275971 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275969 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001275973 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275966 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001275976 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275975 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275970 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001275978 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275977 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275968 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001275972 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001275967 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001275974 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001074425 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_006709 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001074424 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_001074422 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001074423 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001074420 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_001074421 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 323 KGFCNISLF 331>NP_002647 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KSFANINLY 9 K F NI+L+ Sbjct: 271 KGFCNISLF 279>NP_061916 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 FANINLY 9 F N+N+Y Sbjct: 359 FENVNIY 365>XP_006717514 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 FANINLY 9 F N+N+Y Sbjct: 359 FENVNIY 365>NP_219482 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KSFANINLY 9 K FA+ N Y Sbjct: 74 KKFASFNAY 82>NP_037517 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FANINL 8 FAN+NL Sbjct: 135 FANLNL 140>NP_071379 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSFANINL 8 K F+NIN+ Sbjct: 491 KVFSNINI 498>XP_005260849 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSFANINL 8 K F+NIN+ Sbjct: 302 KVFSNINI 309>NP_942093 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSFANINL 8 K F+NIN+ Sbjct: 491 KVFSNINI 498Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 452,289 Number of extensions: 714 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |