Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 299 NP_001185763 20 299 NP_055459 20 299 XP_006726410 20 299 XP_006711719 20 299 XP_006711718 20 299 XP_006711717 20 299 XP_006711716 20 299 XP_006711715 20 299 XP_006711714 20 299 XP_006711713 20 299 XP_006711712 20 299 XP_006711711 20 299 XP_006711710 20 299 XP_006711709 20 299 XP_005277503 20 299 XP_005273038 20 299 XP_006711708 20 299 XP_005277500 20 299 XP_006711707 20 299 XP_005277499 20 299 XP_006711706 20 299 XP_006711705 20 299 XP_006711164 20 299 XP_006710143 20 299 XP_006710142 20 299 XP_006710141 20 299 NP_001239264 17 4312 NP_005251 17 4312 NP_060151 17 4312 NP_001996 17 4312 NP_001137257 17 4312 NP_001137255 17 4312 NP_001137256 17 4312 NP_005986 17 4312 NP_116255 17 4312 XP_005254784 17 4312 XP_005254783 17 4312 XP_005254939 17 4312 XP_005254938 17 4312 XP_005254937 17 4312 XP_005254934 17 4312 XP_005271926 17 4312 NP_004548 16 5631 NP_001005335 16 5631 NP_001524 16 5631 NP_001012520 16 5631 NP_003743 16 5631 NP_001254503 16 5631 NP_001273407 16 5631 NP_001032897 16 5631 NP_683721 16 5631 NP_001186071 16 5631 NP_001093131 16 5631 XP_005255592 16 5631 XP_006717127 16 5631 NP_075384 16 7355 XP_005256713 16 7355 NP_036424 15 9605 NP_001191344 15 9605 NP_001191343 15 9605 NP_071447 15 9605 NP_001269263 15 9605 NP_001269264 15 9605 NP_001245257 15 9605 NP_777614 15 9605 XP_006722776 15 9605 XP_006713148 15 9605 XP_005271164 15 9605 XP_005271163 15 9605>NP_001185761 Length = 2240 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1510 KSEKDQAGL 1518>NP_001185763 Length = 2362 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1554 KSEKDQAGL 1562>NP_055459 Length = 2346 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1554 KSEKDQAGL 1562>XP_006726410 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1357 KSEKDQAGL 1365>XP_006711719 Length = 2302 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1510 KSEKDQAGL 1518>XP_006711718 Length = 1436 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 561 KSEKDQAGL 569>XP_006711717 Length = 2385 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1510 KSEKDQAGL 1518>XP_006711716 Length = 2411 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1619 KSEKDQAGL 1627>XP_006711715 Length = 2428 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1553 KSEKDQAGL 1561>XP_006711714 Length = 2429 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1554 KSEKDQAGL 1562>XP_006711713 Length = 2432 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1557 KSEKDQAGL 1565>XP_006711712 Length = 2473 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_006711711 Length = 2482 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1607 KSEKDQAGL 1615>XP_006711710 Length = 2494 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1619 KSEKDQAGL 1627>XP_006711709 Length = 2495 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1620 KSEKDQAGL 1628>XP_005277503 Length = 2498 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_005273038 Length = 2509 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_006711708 Length = 2512 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_005277500 Length = 2525 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_006711707 Length = 2553 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_005277499 Length = 2561 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_006711706 Length = 2591 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1716 KSEKDQAGL 1724>XP_006711705 Length = 2592 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1717 KSEKDQAGL 1725>XP_006711164 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 1357 KSEKDQAGL 1365>XP_006710143 Length = 562 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 396 KSEKDQAGL 404>XP_006710142 Length = 671 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 505 KSEKDQAGL 513>XP_006710141 Length = 672 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KSERDQAGL 9 KSE+DQAGL Sbjct: 506 KSEKDQAGL 514>NP_001239264 Length = 1302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 SE+DQAG Sbjct: 813 SEQDQAG 819>NP_005251 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ERDQAGL 9 ERD+AGL Sbjct: 55 ERDRAGL 61>NP_060151 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 +S RDQ+GL Sbjct: 156 ESTRDQSGL 164>NP_001996 Length = 822 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>NP_001137257 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>NP_001137255 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>NP_001137256 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>NP_005986 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 +++RDQ GL Sbjct: 354 RADRDQGGL 362>NP_116255 Length = 1302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 SE+DQAG Sbjct: 813 SEQDQAG 819>XP_005254784 Length = 1303 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 SE+DQAG Sbjct: 813 SEQDQAG 819>XP_005254783 Length = 1303 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 SE+DQAG Sbjct: 813 SEQDQAG 819>XP_005254939 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>XP_005254938 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>XP_005254937 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>XP_005254934 Length = 822 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 KS+R+ AGL Sbjct: 39 KSDREYAGL 47>XP_005271926 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KSERDQAG 8 K RDQAG Sbjct: 406 KKRRDQAG 413>NP_004548 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RDQAGL 9 RDQAGL Sbjct: 1796 RDQAGL 1801>NP_001005335 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSERDQAGL 9 KSER +GL Sbjct: 405 KSERSSSGL 413>NP_001524 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSERDQAGL 9 KSER +GL Sbjct: 538 KSERSSSGL 546>NP_001012520 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSERDQAGL 9 KS+RDQ L Sbjct: 329 KSQRDQLSL 337>NP_003743 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 531 KSEQDQA 537>NP_001254503 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 531 KSEQDQA 537>NP_001273407 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 521 KSEQDQA 527>NP_001032897 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 531 KSEQDQA 537>NP_683721 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KSERDQAGL 9 ++ER QAGL Sbjct: 553 EAERGQAGL 561>NP_001186071 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 531 KSEQDQA 537>NP_001093131 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 532 KSEQDQA 538>XP_005255592 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KSERDQA 7 KSE+DQA Sbjct: 532 KSEQDQA 538>XP_006717127 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KSERDQAGL 9 KS+RDQ L Sbjct: 329 KSQRDQLSL 337>NP_075384 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K +RD+AG Sbjct: 610 KPQRDEAG 617>XP_005256713 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SERDQAGL 9 SER++AG+ Sbjct: 1036 SEREEAGV 1043>NP_036424 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K+E +QAG Sbjct: 425 KAEEEQAG 432>NP_001191344 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERDQAG 8 ERD+AG Sbjct: 194 ERDEAG 199>NP_001191343 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERDQAG 8 ERD+AG Sbjct: 268 ERDEAG 273>NP_071447 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERDQAG 8 ERD+AG Sbjct: 299 ERDEAG 304>NP_001269263 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K+E +QAG Sbjct: 60 KAEEEQAG 67>NP_001269264 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K+E +QAG Sbjct: 308 KAEEEQAG 315>NP_001245257 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K+E +QAG Sbjct: 441 KAEEEQAG 448>NP_777614 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 SER++AG Sbjct: 1036 SEREEAG 1042>XP_006722776 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KSERDQAG 8 K+E +QAG Sbjct: 425 KAEEEQAG 432>XP_006713148 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SERDQAG 8 +E+DQAG Sbjct: 669 NEQDQAG 675>XP_005271164 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERDQAG 8 ERD+AG Sbjct: 194 ERDEAG 199>XP_005271163 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERDQAG 8 ERD+AG Sbjct: 299 ERDEAG 304Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.121 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 587,326 Number of extensions: 927 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |