Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006505 16 5631 XP_005265428 16 5631 NP_056180 16 7355 NP_001186069 16 7355 NP_001165160 16 7355 XP_006712850 16 7355 XP_005263865 16 7355 XP_005263864 16 7355 XP_005263863 16 7355 XP_005263861 16 7355 NP_001020751 16 7355 NP_113633 16 7355 NP_005793 15 9605 NP_001182551 15 9605 NP_001124162 15 9605 NP_055655 15 9605 NP_055987 15 9605 XP_006715384 15 9605 XP_005245087 15 9605 XP_005245086 15 9605 XP_005245085 15 9605 XP_005245084 15 9605 XP_006711302 15 9605 XP_005245083 15 9605 XP_005245082 15 9605 XP_005245081 15 9605 XP_005245080 15 9605 XP_005245079 15 9605 XP_005245077 15 9605 XP_005245076 15 9605 XP_006711301 15 9605 XP_005245075 15 9605 XP_005245074 15 9605 XP_005245073 15 9605 XP_005245072 15 9605>NP_006505 Length = 1956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K+T SAEY Sbjct: 592 KKTFLSAEY 600>XP_005265428 Length = 1959 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K+T SAEY Sbjct: 595 KKTFLSAEY 603>NP_056180 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K T+S AEY Sbjct: 301 KMTLSYAEY 309>NP_001186069 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 279 KVTISYAEY 287>NP_001165160 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K T+S AEY Sbjct: 178 KMTLSYAEY 186>XP_006712850 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 165 KVTISYAEY 173>XP_005263865 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 165 KVTISYAEY 173>XP_005263864 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 242 KVTISYAEY 250>XP_005263863 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 287 KVTISYAEY 295>XP_005263861 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 324 KVTISYAEY 332>NP_001020751 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K T+S AEY Sbjct: 264 KMTLSYAEY 272>NP_113633 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 K TIS AEY Sbjct: 279 KVTISYAEY 287>NP_005793 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 +RT+S A Y Sbjct: 722 RRTLSRAHY 730>NP_001182551 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KRTISSAEY 9 +RT+S A Y Sbjct: 657 RRTLSRAHY 665>NP_001124162 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 T+SS+EY Sbjct: 613 TLSSSEY 619>NP_055655 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RTISSAEY 9 R ISS EY Sbjct: 263 RQISSGEY 270>NP_055987 Length = 2817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2173 SVSSAEY 2179>XP_006715384 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 T+SS+EY Sbjct: 596 TLSSSEY 602>XP_005245087 Length = 2708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245086 Length = 2714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245085 Length = 2718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245084 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_006711302 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245083 Length = 2774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245082 Length = 2779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245081 Length = 2819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245080 Length = 2824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245079 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245077 Length = 2858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245076 Length = 2869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_006711301 Length = 2896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2173 SVSSAEY 2179>XP_005245075 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2170 SVSSAEY 2176>XP_005245074 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181>XP_005245073 Length = 2901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2173 SVSSAEY 2179>XP_005245072 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TISSAEY 9 ++SSAEY Sbjct: 2175 SVSSAEY 2181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.111 0.267 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 324,995 Number of extensions: 456 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |