Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245135                                                           17    3301
NP_001245136                                                           17    3301
NP_005419                                                              17    3301
NP_001005415                                                           17    3301
XP_006722825                                                           17    3301
NP_057580                                                              17    3301
NP_001095272                                                           17    4312
NP_057705                                                              17    4312
XP_005253027                                                           17    4312
XP_006718311                                                           17    4312
XP_006718310                                                           17    4312
XP_005253024                                                           17    4312
XP_005253022                                                           17    4312
XP_005253021                                                           17    4312
XP_005253020                                                           17    4312
XP_005253019                                                           17    4312
NP_001121782                                                           16    5631
NP_004675                                                              16    5631
NP_001157973                                                           16    5631
NP_062817                                                              16    5631
NP_001164161                                                           16    5631
NP_066025                                                              16    5631
XP_005261745                                                           16    5631
XP_005261744                                                           16    5631
XP_005261743                                                           16    5631
XP_006724347                                                           16    5631
XP_006724346                                                           16    5631
XP_006724345                                                           16    5631
XP_006724344                                                           16    5631
XP_005253094                                                           16    5631
XP_005253093                                                           16    5631
XP_005253092                                                           16    5631
XP_005253091                                                           16    5631
XP_005253090                                                           16    5631
XP_006718331                                                           16    5631
XP_005253089                                                           16    5631
NP_001128493                                                           16    7355
NP_001128495                                                           16    7355
NP_001128494                                                           16    7355
NP_115589                                                              16    7355
NP_036298                                                              16    7355
NP_002883                                                              16    7355
NP_075377                                                              16    7355
NP_075376                                                              16    7355
NP_997190                                                              16    7355
XP_005268022                                                           16    7355
XP_005268021                                                           16    7355
XP_005251496                                                           16    7355
XP_006714342                                                           16    7355
XP_005263203                                                           16    7355
XP_005263202                                                           16    7355
XP_005263201                                                           16    7355
XP_005263200                                                           16    7355
XP_006713883                                                           16    7355
XP_005264655                                                           16    7355
XP_005264654                                                           16    7355
XP_005264653                                                           16    7355
NP_064611                                                              16    7355
NP_001092873                                                           16    7355
NP_001269937                                                           15    9605
NP_001269936                                                           15    9605
NP_001269934                                                           15    9605
NP_001269933                                                           15    9605
NP_001269932                                                           15    9605
NP_001269931                                                           15    9605
NP_001269930                                                           15    9605
NP_001269929                                                           15    9605
NP_001269927                                                           15    9605
NP_001269925                                                           15    9605
NP_001269924                                                           15    9605
NP_005549                                                              15    9605
NP_003425                                                              15    9605
NP_001076799                                                           15    9605
NP_001269928                                                           15    9605
NP_001269935                                                           15    9605
NP_001269926                                                           15    9605
XP_006723682                                                           15    9605
XP_006723681                                                           15    9605
XP_006723680                                                           15    9605
XP_006723679                                                           15    9605
XP_005260880                                                           15    9605
XP_005260877                                                           15    9605
XP_005260876                                                           15    9605
XP_005260875                                                           15    9605
NP_001929                                                              15    9605
>NP_001245135
          Length = 823

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           K  EKRTIS
Sbjct: 744 KEPEKRTIS 752
>NP_001245136
          Length = 813

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           K  EKRTIS
Sbjct: 734 KEPEKRTIS 742
>NP_005419
          Length = 845

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           K  EKRTIS
Sbjct: 766 KEPEKRTIS 774
>NP_001005415
          Length = 246

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RTEKRT+
Sbjct: 132 RTEKRTL 138
>XP_006722825
          Length = 246

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RTEKRT+
Sbjct: 132 RTEKRTL 138
>NP_057580
          Length = 246

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RTEKRT+
Sbjct: 132 RTEKRTL 138
>NP_001095272
          Length = 680

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 342 KQTESRTIT 350
>NP_057705
          Length = 634

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_005253027
          Length = 629

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_006718311
          Length = 636

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 298 KQTESRTIT 306
>XP_006718310
          Length = 649

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_005253024
          Length = 680

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 342 KQTESRTIT 350
>XP_005253022
          Length = 681

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_005253021
          Length = 681

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_005253020
          Length = 681

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>XP_005253019
          Length = 681

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K+TE RTI+
Sbjct: 343 KQTESRTIT 351
>NP_001121782
          Length = 664

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K TE++T+S
Sbjct: 309 KETEEKTVS 317
>NP_004675
          Length = 664

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           K TE++T+S
Sbjct: 309 KETEEKTVS 317
>NP_001157973
          Length = 985

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 251 KRTRRRTAS 259
>NP_062817
          Length = 985

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 251 KRTRRRTAS 259
>NP_001164161
          Length = 807

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 453 KRTEKR 458
>NP_066025
          Length = 971

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 608 KRTEKR 613
>XP_005261745
          Length = 986

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 251 KRTRRRTAS 259
>XP_005261744
          Length = 986

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 251 KRTRRRTAS 259
>XP_005261743
          Length = 986

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 251 KRTRRRTAS 259
>XP_006724347
          Length = 1002

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 292 KRTRRRTAS 300
>XP_006724346
          Length = 1003

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 292 KRTRRRTAS 300
>XP_006724345
          Length = 1026

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 292 KRTRRRTAS 300
>XP_006724344
          Length = 1027

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KRT +RT S
Sbjct: 292 KRTRRRTAS 300
>XP_005253094
          Length = 873

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 453 KRTEKR 458
>XP_005253093
          Length = 919

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 499 KRTEKR 504
>XP_005253092
          Length = 953

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 608 KRTEKR 613
>XP_005253091
          Length = 987

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 567 KRTEKR 572
>XP_005253090
          Length = 999

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 579 KRTEKR 584
>XP_006718331
          Length = 1027

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 607 KRTEKR 612
>XP_005253089
          Length = 1028

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRTEKR 6
           KRTEKR
Sbjct: 608 KRTEKR 613
>NP_001128493
          Length = 381

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>NP_001128495
          Length = 381

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>NP_001128494
          Length = 381

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>NP_115589
          Length = 391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>NP_036298
          Length = 956

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           +R E+RT+S
Sbjct: 103 RRRERRTLS 111
>NP_002883
          Length = 1257

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    KRTEKRT 7
            KRT KRT
Sbjct: 1088 KRTPKRT 1094
>NP_075377
          Length = 1188

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    KRTEKRT 7
            KRT KRT
Sbjct: 1088 KRTPKRT 1094
>NP_075376
          Length = 1203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    KRTEKRT 7
            KRT KRT
Sbjct: 1088 KRTPKRT 1094
>NP_997190
          Length = 572

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KRTEKRT 7
           KRT+K+T
Sbjct: 464 KRTDKKT 470
>XP_005268022
          Length = 1208

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    KRTEKRT 7
            KRT KRT
Sbjct: 1108 KRTPKRT 1114
>XP_005268021
          Length = 1277

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    KRTEKRT 7
            KRT KRT
Sbjct: 1108 KRTPKRT 1114
>XP_005251496
          Length = 653

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRTEKRTIS 9
           +R E+RT+S
Sbjct: 103 RRRERRTLS 111
>XP_006714342
          Length = 690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>XP_005263203
          Length = 689

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>XP_005263202
          Length = 690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>XP_005263201
          Length = 690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>XP_005263200
          Length = 873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   KRTEKRTI 8
           K T+KRT+
Sbjct: 245 KSTDKRTV 252
>XP_006713883
          Length = 557

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KRTEKRT 7
           KRT+K+T
Sbjct: 449 KRTDKKT 455
>XP_005264655
          Length = 391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>XP_005264654
          Length = 391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>XP_005264653
          Length = 391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RTEKRTIS 9
           RT+++TIS
Sbjct: 300 RTQRKTIS 307
>NP_064611
          Length = 689

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>NP_001092873
          Length = 689

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  KRTEKRTI 8
          K T+KRT+
Sbjct: 61 KSTDKRTV 68
>NP_001269937
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  RTEKRTI 8
          RT+KRT+
Sbjct: 62 RTKKRTL 68
>NP_001269936
          Length = 667

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 170 RTKKRTL 176
>NP_001269934
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 138 RTKKRTL 144
>NP_001269933
          Length = 591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 94  RTKKRTL 100
>NP_001269932
          Length = 591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 94  RTKKRTL 100
>NP_001269931
          Length = 657

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 160 RTKKRTL 166
>NP_001269930
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>NP_001269929
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>NP_001269927
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>NP_001269925
          Length = 671

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 174 RTKKRTL 180
>NP_001269924
          Length = 653

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 156 RTKKRTL 162
>NP_005549
          Length = 517

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   KRTEKRTIS 9
           KR+  RTIS
Sbjct: 367 KRSSPRTIS 375
>NP_003425
          Length = 653

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 156 RTKKRTL 162
>NP_001076799
          Length = 653

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 156 RTKKRTL 162
>NP_001269928
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>NP_001269935
          Length = 661

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 164 RTKKRTL 170
>NP_001269926
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>XP_006723682
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  RTEKRTI 8
          RT+KRT+
Sbjct: 62 RTKKRTL 68
>XP_006723681
          Length = 590

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  RTEKRTI 8
          RT+KRT+
Sbjct: 93 RTKKRTL 99
>XP_006723680
          Length = 591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 94  RTKKRTL 100
>XP_006723679
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>XP_005260880
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>XP_005260877
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>XP_005260876
          Length = 654

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 157 RTKKRTL 163
>XP_005260875
          Length = 656

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTEKRTI 8
           RT+KRT+
Sbjct: 159 RTKKRTL 165
>NP_001929
          Length = 176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  RTEKRTIS 9
          ++EK+TIS
Sbjct: 60 KSEKKTIS 67
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.305    0.115    0.271 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 453,292
Number of extensions: 696
Number of successful extensions: 85
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package