Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 XP_006717990 20 299 XP_006717989 20 299 XP_005268685 20 509 NP_954863 18 1135 NP_570141 18 1135 NP_001135440 18 1135 NP_954868 17 2528 NP_954869 17 2528 NP_001277153 17 2528 NP_954870 17 2528 NP_001135938 17 2528 NP_597700 17 2528 NP_001243839 17 3301 NP_004719 17 3301 NP_001035822 17 4312 NP_001035816 17 4312 NP_001035818 17 4312 NP_001035817 17 4312 NP_001035819 17 4312 NP_056153 17 4312 NP_001025459 17 4312 NP_003122 17 4312 NP_443188 17 4312 NP_003114 17 4312 XP_005276570 17 4312 XP_006723795 17 4312 XP_006723794 17 4312 XP_006723793 17 4312 XP_006723792 17 4312 XP_006723791 17 4312 XP_006723790 17 4312 XP_006721081 17 4312 XP_005255143 17 4312 XP_006721080 17 4312 XP_006721079 17 4312 XP_005255141 17 4312 XP_005270205 17 4312 XP_005270372 17 4312 XP_005277709 17 4312 NP_076950 17 4312 NP_003575 16 5631 NP_003791 16 5631 NP_694969 16 5631 NP_001273357 16 5631 NP_001273355 16 5631 NP_001273336 16 5631 NP_689473 16 5631 XP_005261530 16 5631 XP_006724279 16 5631 XP_006724278 16 5631 XP_006724277 16 5631 XP_006724274 16 5631 XP_006724273 16 5631 XP_005261528 16 5631 XP_005261527 16 5631 XP_006715652 16 5631 XP_005264661 16 5631 NP_001036189 16 7355 NP_954634 16 7355 XP_006720089 16 7355 XP_005253263 16 7355 NP_689541 16 7355 NP_001801 15 9605 NP_057197 15 9605 NP_002010 15 9605 NP_079488 15 9605 NP_001153392 15 9605 NP_001153503 15 9605 NP_001153502 15 9605 NP_849161 15 9605 XP_005256734 15 9605 XP_006721604 15 9605 XP_005256733 15 9605 XP_005268519 15 9605 XP_006714849 15 9605 XP_005268518 15 9605 NP_057547 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 K RTGVMIC Sbjct: 128 KGRTGVMIC 136>XP_006717990 Length = 175 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 K RTGVMIC Sbjct: 113 KGRTGVMIC 121>XP_006717989 Length = 388 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 K RTGVMIC Sbjct: 113 KGRTGVMIC 121>XP_005268685 Length = 463 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 KRRTGV +C Sbjct: 49 KRRTGVHLC 57>NP_954863 Length = 522 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRRTGVMIC 9 K RTG M+C Sbjct: 324 KGRTGTMVC 332>NP_570141 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRRTGVMIC 9 K RTG M+C Sbjct: 247 KGRTGTMVC 255>NP_001135440 Length = 411 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRRTGVMIC 9 K RTG M+C Sbjct: 213 KGRTGTMVC 221>NP_954868 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG M+C Sbjct: 326 RTGTMVC 332>NP_954869 Length = 513 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG M+C Sbjct: 306 RTGTMVC 312>NP_001277153 Length = 413 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG M+C Sbjct: 206 RTGTMVC 212>NP_954870 Length = 551 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG M+C Sbjct: 344 RTGTMVC 350>NP_001135938 Length = 423 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K RTGVMI Sbjct: 104 KSRTGVMI 111>NP_597700 Length = 523 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K RTGVMI Sbjct: 204 KSRTGVMI 211>NP_001243839 Length = 715 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV IC Sbjct: 465 RTGVCIC 471>NP_004719 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV IC Sbjct: 533 RTGVCIC 539>NP_001035822 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 278 RTGVFLC 284>NP_001035816 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 359 RTGVFLC 365>NP_001035818 Length = 269 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 208 RTGVFLC 214>NP_001035817 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 350 RTGVFLC 356>NP_001035819 Length = 228 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 167 RTGVFLC 173>NP_056153 Length = 1541 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 162 KKKTGVML 169>NP_001025459 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 KRRTG ++ Sbjct: 282 KRRTGALV 289>NP_003122 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRRTGVM 7 KR+TG+M Sbjct: 163 KRKTGIM 169>NP_443188 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 356 KRRTGLLL 363>NP_003114 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 KRRTG ++ Sbjct: 282 KRRTGALV 289>XP_005276570 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 KRRTG ++ Sbjct: 282 KRRTGALV 289>XP_006723795 Length = 1480 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 152 KKKTGVML 159>XP_006723794 Length = 1490 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 162 KKKTGVML 169>XP_006723793 Length = 1513 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 134 KKKTGVML 141>XP_006723792 Length = 1513 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 134 KKKTGVML 141>XP_006723791 Length = 1531 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 152 KKKTGVML 159>XP_006723790 Length = 1540 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 K++TGVM+ Sbjct: 161 KKKTGVML 168>XP_006721081 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 136 KRRTGLLL 143>XP_005255143 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 176 KRRTGLLL 183>XP_006721080 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 356 KRRTGLLL 363>XP_006721079 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 356 KRRTGLLL 363>XP_005255141 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRRTGVMI 8 KRRTG+++ Sbjct: 356 KRRTGLLL 363>XP_005270205 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG+ IC Sbjct: 419 RTGICIC 425>XP_005270372 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 278 RTGVFLC 284>XP_005277709 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTGV +C Sbjct: 278 RTGVFLC 284>NP_076950 Length = 737 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG+ IC Sbjct: 484 RTGICIC 490>NP_003575 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 205 RTGYLIC 211>NP_003791 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 132 RTGFLIC 138>NP_694969 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 + RTG+++C Sbjct: 2 QNRTGLILC 10>NP_001273357 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 72 RTGFLIC 78>NP_001273355 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 132 RTGFLIC 138>NP_001273336 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRRTGV 6 KRRTGV Sbjct: 116 KRRTGV 121>NP_689473 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRRTGV 6 KRRTGV Sbjct: 116 KRRTGV 121>XP_005261530 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 474 RRTSVLFC 481>XP_006724279 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 492 RRTSVLFC 499>XP_006724278 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_006724277 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_006724274 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_006724273 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_005261528 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_005261527 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_006715652 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 103 RTGFLIC 109>XP_005264661 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG +IC Sbjct: 205 RTGYLIC 211>NP_001036189 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TG++IC Sbjct: 377 TGILIC 382>NP_954634 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG+ IC Sbjct: 220 RTGLRIC 226>XP_006720089 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG+ IC Sbjct: 178 RTGLRIC 184>XP_005253263 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 KRRTGVMIC 9 + TG+++C Sbjct: 1203 EHHTGILVC 1211>NP_689541 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RTGVMIC 9 RTG+ IC Sbjct: 177 RTGLRIC 183>NP_001801 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KRRTGVMIC 9 +RR GV+ C Sbjct: 127 RRRHGVVSC 135>NP_057197 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K+R GVM+ Sbjct: 681 KQRAGVML 688>NP_002010 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_079488 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 R+TG IC Sbjct: 329 RKTGHQIC 336>NP_001153392 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_001153503 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_001153502 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TGVMIC 9 TGV++C Sbjct: 7 TGVLLC 12>NP_849161 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KRRTGVMIC 9 +R +GV++C Sbjct: 15 RRPSGVVLC 23>XP_005256734 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K+R GVM+ Sbjct: 547 KQRAGVML 554>XP_006721604 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K+R GVM+ Sbjct: 681 KQRAGVML 688>XP_005256733 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRRTGVMI 8 K+R GVM+ Sbjct: 680 KQRAGVML 687>XP_005268519 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 R+TG IC Sbjct: 284 RKTGHQIC 291>XP_006714849 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 R+TG IC Sbjct: 284 RKTGHQIC 291>XP_005268518 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 R+TG IC Sbjct: 284 RKTGHQIC 291>NP_057547 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTGVMIC 9 R+TG IC Sbjct: 284 RKTGHQIC 291Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.145 0.481 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 540,201 Number of extensions: 969 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |