Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1482 NP_001035957 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 XP_005264952 18 1935 NP_001017535 17 4312 NP_000367 17 4312 NP_001017536 17 4312 XP_006719650 17 4312 NP_055872 15 9605 NP_055478 15 9605 NP_004809 15 9605 NP_078928 15 9605 XP_005255036 15 9605 XP_006719852 15 9605 XP_005266357 15 9605 XP_006719851 15 9605 XP_006719850 15 9605 XP_006719849 15 9605 XP_006719848 15 9605 XP_005266356 15 9605 XP_006719847 15 9605 XP_006719846 15 9605 XP_006719845 15 9605 XP_006719844 15 9605 XP_006719843 15 9605 XP_006719842 15 9605 XP_005271413 15 9605 XP_005271412 15 9605 XP_005271411 15 9605>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1946 KRQRVTAIL 1954>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1967 KRQRVTAIL 1975>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1977 KRQRVTAIL 1985>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1977 KRQRVTAIL 1985>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1946 KRQRVTAIL 1954>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1956 KRQRVTAIL 1964>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1977 KRQRVTAIL 1985>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1964 KRQRVTAIL 1972>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1967 KRQRVTAIL 1975>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 KRQRV AIL Sbjct: 1977 KRQRVTAIL 1985>XP_005264952 Length = 257 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 KR+RV+A+L Sbjct: 54 KRERVLAVL 62>NP_001017535 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 ++QR+IAIL Sbjct: 127 EQQRIIAIL 135>NP_000367 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 ++QR+IAIL Sbjct: 127 EQQRIIAIL 135>NP_001017536 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 ++QR+IAIL Sbjct: 177 EQQRIIAIL 185>XP_006719650 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 ++QR+IAIL Sbjct: 127 EQQRIIAIL 135>NP_055872 Length = 4678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>NP_055478 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 1040 KRQRVI 1045>NP_004809 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KRQRVIAIL 9 KR++++AIL Sbjct: 651 KRKKLLAIL 659>NP_078928 Length = 2015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 +R RVIA+L Sbjct: 1940 QRGRVIAVL 1948>XP_005255036 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRQRVIAIL 9 +R RVIA+L Sbjct: 1235 QRGRVIAVL 1243>XP_006719852 Length = 4752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_005266357 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719851 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719850 Length = 4697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719849 Length = 4703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719848 Length = 4737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_005266356 Length = 4755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719847 Length = 4761 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719846 Length = 4763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719845 Length = 4772 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719844 Length = 4789 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719843 Length = 4794 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_006719842 Length = 4797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 862 KRQRVI 867>XP_005271413 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 949 KRQRVI 954>XP_005271412 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 1040 KRQRVI 1045>XP_005271411 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRQRVI 6 KRQRVI Sbjct: 1040 KRQRVI 1045Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.152 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,436 Number of extensions: 493 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |