Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_071754 18 1135 NP_001185763 18 1135 NP_001002810 18 1135 NP_055459 18 1135 NP_001182189 18 1135 NP_001002812 18 1135 NP_001182190 18 1135 XP_006711719 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 NP_004953 17 4312 XP_006717825 17 4312 NP_004841 16 5631 NP_056386 16 5631 XP_006715520 16 5631 XP_005246247 16 5631 NP_001093879 16 5631 NP_005742 16 7355 NP_671714 16 7355 NP_008893 16 7355 NP_001171570 16 7355 NP_001007089 16 7355 XP_006715890 16 7355 XP_005250160 16 7355 XP_005250159 16 7355 NP_001074001 16 7355 NP_000811 15 9605 NP_001137417 15 9605 NP_001137418 15 9605 NP_775966 15 9605 NP_001191385 15 9605 NP_055907 15 9605 NP_001001894 15 9605 NP_003307 15 9605 NP_001192 15 9605 NP_001191442 15 9605 NP_057279 15 9605 NP_001271188 15 9605 XP_005261112 15 9605 XP_005261113 15 9605 XP_005261111 15 9605 XP_005261109 15 9605 XP_005261110 15 9605 XP_005261108 15 9605 XP_005261106 15 9605 XP_005261107 15 9605 XP_005261105 15 9605 XP_005261104 15 9605 XP_005261103 15 9605 XP_005261102 15 9605 XP_005255242 15 9605 XP_005255241 15 9605 XP_005255240 15 9605 XP_005255239 15 9605 XP_006714354 15 9605 NP_066986 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>NP_071754 Length = 310 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 183 KRNIELKVE 191>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>NP_001002810 Length = 173 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>NP_001182189 Length = 141 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 14 KRNIELKVE 22>NP_001002812 Length = 969 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>NP_001182190 Length = 176 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 49 KRNIELKVE 57>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 46 KRNIELKVE 54>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 49 KRNIELKVE 57>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 KRNI LKVE Sbjct: 112 KRNIELKVE 120>NP_004953 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 RN+VLKV Sbjct: 460 RNVVLKV 466>XP_006717825 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 RN+VLKV Sbjct: 459 RNVVLKV 465>NP_004841 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNIVLKVE 9 RN+ LK+E Sbjct: 790 RNLTLKIE 797>NP_056386 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RNI+LK++ Sbjct: 1072 RNIILKLQ 1079>XP_006715520 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RNI+LK++ Sbjct: 1016 RNIILKLQ 1023>XP_005246247 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNIVLKVE 9 RN+ LK+E Sbjct: 790 RNLTLKIE 797>NP_001093879 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RNI+LK++ Sbjct: 1065 RNIILKLQ 1072>NP_005742 Length = 3907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RN+V+K+E Sbjct: 3610 RNMVMKLE 3617>NP_671714 Length = 3899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RN+V+K+E Sbjct: 3602 RNMVMKLE 3609>NP_008893 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N++LK+E Sbjct: 72 KPNLILKLE 80>NP_001171570 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N++LK+E Sbjct: 72 KPNLILKLE 80>NP_001007089 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N++LK+E Sbjct: 53 KPNLILKLE 61>XP_006715890 Length = 3860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RN+V+K+E Sbjct: 3563 RNMVMKLE 3570>XP_005250160 Length = 3939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RN+V+K+E Sbjct: 3642 RNMVMKLE 3649>XP_005250159 Length = 3952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNIVLKVE 9 RN+V+K+E Sbjct: 3655 RNMVMKLE 3662>NP_001074001 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNIVLKVE 9 +NIVLK E Sbjct: 82 KNIVLKFE 89>NP_000811 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 RN+V+KV Sbjct: 389 RNLVIKV 395>NP_001137417 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 RN+V+KV Sbjct: 116 RNLVIKV 122>NP_001137418 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 RN+V+KV Sbjct: 90 RNLVIKV 96>NP_775966 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 K+NI+LK Sbjct: 7 KQNIILK 13>NP_001191385 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N+++K+E Sbjct: 53 KPNVIIKLE 61>NP_055907 Length = 3661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 +RN+VLK Sbjct: 3285 RRNLVLK 3291>NP_001001894 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1184 KKNIKTKVE 1192>NP_003307 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1184 KKNIKTKVE 1192>NP_001192 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 +N+VLKV Sbjct: 454 KNVVLKV 460>NP_001191442 Length = 113 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N+++K+E Sbjct: 53 KPNVIIKLE 61>NP_057279 Length = 1780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K +I+LK+E Sbjct: 1150 KESIILKLE 1158>NP_001271188 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K +I+LK+E Sbjct: 1190 KESIILKLE 1198>XP_005261112 Length = 1733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 892 KKNIKTKVE 900>XP_005261113 Length = 1733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 892 KKNIKTKVE 900>XP_005261111 Length = 2043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1202 KKNIKTKVE 1210>XP_005261109 Length = 2043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1202 KKNIKTKVE 1210>XP_005261110 Length = 2043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1202 KKNIKTKVE 1210>XP_005261108 Length = 2047 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1206 KKNIKTKVE 1214>XP_005261106 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1218 KKNIKTKVE 1226>XP_005261107 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1218 KKNIKTKVE 1226>XP_005261105 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1218 KKNIKTKVE 1226>XP_005261104 Length = 2063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1222 KKNIKTKVE 1230>XP_005261103 Length = 2065 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1224 KKNIKTKVE 1232>XP_005261102 Length = 2081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRNIVLKVE 9 K+NI KVE Sbjct: 1240 KKNIKTKVE 1248>XP_005255242 Length = 3609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 +RN+VLK Sbjct: 3233 RRNLVLK 3239>XP_005255241 Length = 3637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 +RN+VLK Sbjct: 3261 RRNLVLK 3267>XP_005255240 Length = 3663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 +RN+VLK Sbjct: 3287 RRNLVLK 3293>XP_005255239 Length = 3689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRNIVLK 7 +RN+VLK Sbjct: 3313 RRNLVLK 3319>XP_006714354 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNIVLKV 8 +N+VLKV Sbjct: 421 KNVVLKV 427>NP_066986 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KRNIVLKVE 9 K N+++K+E Sbjct: 53 KPNVIIKLE 61Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.139 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,701 Number of extensions: 780 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |