Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_060868 17 2528 XP_005265376 17 2528 XP_005265375 17 2528 NP_003250 17 3301 NP_064525 17 4312 NP_690001 17 4312 NP_596870 17 4312 NP_001190996 17 4312 NP_001190999 17 4312 NP_001190998 17 4312 NP_858056 17 4312 NP_001190997 17 4312 XP_006719578 17 4312 XP_006719577 17 4312 XP_006719576 17 4312 XP_006719575 17 4312 XP_006719574 17 4312 XP_006719573 17 4312 XP_005269086 17 4312 XP_006719572 17 4312 XP_006719571 17 4312 XP_005269085 17 4312 XP_006719570 17 4312 XP_006719569 17 4312 XP_006719568 17 4312 XP_006719567 17 4312 NP_001420 16 5631 NP_004371 16 5631 NP_001073315 16 5631 NP_001186346 16 5631 XP_006725396 16 5631 XP_006725395 16 5631 XP_006725393 16 5631 XP_006724228 16 5631 XP_006722057 16 5631 XP_006722056 16 5631 XP_006722054 16 5631 XP_005255182 16 5631 XP_006720911 16 5631 XP_005255181 16 5631 NP_055289 16 7355 NP_001009568 16 7355 NP_001157918 16 7355 NP_004620 15 9605 NP_001128527 15 9605 NP_001244957 15 9605 NP_001055 15 9605 XP_006713382 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRMYAALGD 9 +RMYAALGD Sbjct: 3611 ERMYAALGD 3619>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRMYAALGD 9 +RMYAALGD Sbjct: 3611 ERMYAALGD 3619>NP_060868 Length = 1091 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MYAALGD 9 +YAALGD Sbjct: 23 LYAALGD 29>XP_005265376 Length = 877 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MYAALGD 9 +YAALGD Sbjct: 23 LYAALGD 29>XP_005265375 Length = 1085 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MYAALGD 9 +YAALGD Sbjct: 23 LYAALGD 29>NP_003250 Length = 924 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RMYAALGD 9 R+Y ALGD Sbjct: 261 RVYLALGD 268>NP_064525 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 163 KRILASLGD 171>NP_690001 Length = 1248 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>NP_596870 Length = 5604 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 K+MY+ +GD Sbjct: 4619 KQMYSHIGD 4627>NP_001190996 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 132 KRILASLGD 140>NP_001190999 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 163 KRILASLGD 171>NP_001190998 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 163 KRILASLGD 171>NP_858056 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 163 KRILASLGD 171>NP_001190997 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 163 KRILASLGD 171>XP_006719578 Length = 1067 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719577 Length = 1184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 933 KRILASLGD 941>XP_006719576 Length = 1199 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719575 Length = 1200 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719574 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719573 Length = 1235 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_005269086 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 933 KRILASLGD 941>XP_006719572 Length = 1259 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719571 Length = 1260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_005269085 Length = 1260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719570 Length = 1273 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719569 Length = 1283 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719568 Length = 1284 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>XP_006719567 Length = 1284 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRMYAALGD 9 KR+ A+LGD Sbjct: 937 KRILASLGD 945>NP_001420 Length = 2414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 465 ERAYAALG 472>NP_004371 Length = 2442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 482 QRAYAALG 489>NP_001073315 Length = 2404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 444 QRAYAALG 451>NP_001186346 Length = 1491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 716 KRVYAAL 722>XP_006725396 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 716 KRVYAAL 722>XP_006725395 Length = 1249 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 716 KRVYAAL 722>XP_006725393 Length = 1473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 698 KRVYAAL 704>XP_006724228 Length = 2388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 465 ERAYAALG 472>XP_006722057 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 716 KRVYAAL 722>XP_006722056 Length = 1249 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 716 KRVYAAL 722>XP_006722054 Length = 1473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMYAAL 7 KR+YAAL Sbjct: 698 KRVYAAL 704>XP_005255182 Length = 2303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 482 QRAYAALG 489>XP_006720911 Length = 2355 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 482 QRAYAALG 489>XP_005255181 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMYAALG 8 +R YAALG Sbjct: 482 QRAYAALG 489>NP_055289 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RMYAALGD 9 ++YAALG+ Sbjct: 127 KVYAALGN 134>NP_001009568 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RMYAALGD 9 ++YAALG+ Sbjct: 127 KVYAALGN 134>NP_001157918 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RMYAALGD 9 R+Y+++GD Sbjct: 120 RLYSSVGD 127>NP_004620 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RMYAALGD 9 R+Y LGD Sbjct: 288 RLYQQLGD 295>NP_001128527 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RMYAALGD 9 R+Y LGD Sbjct: 148 RVYCLLGD 155>NP_001244957 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RMYAALGD 9 R+Y LGD Sbjct: 156 RVYCLLGD 163>NP_001055 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RMYAALGD 9 R+Y LGD Sbjct: 148 RVYCLLGD 155>XP_006713382 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RMYAALGD 9 R+Y LGD Sbjct: 148 RVYCLLGD 155Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.137 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,268 Number of extensions: 673 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |