Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 21 175 NP_000170 21 175 XP_005264328 21 175 NP_001268422 17 2528 NP_001268423 17 2528 NP_002283 17 2528 XP_005265184 17 2528 NP_001276065 17 3301 NP_004778 17 3301 NP_001276064 17 3301 NP_937870 17 3301 NP_937872 17 3301 XP_005248271 17 3301 XP_006714049 17 3301 XP_005248268 17 3301 XP_006713970 17 3301 XP_006713968 17 3301 NP_002917 17 3301 NP_776253 17 4312 NP_003646 17 4312 NP_001269836 17 4312 NP_001269837 17 4312 NP_001269838 17 4312 NP_006576 17 4312 XP_005245126 17 4312 NP_001128206 17 4312 NP_039224 17 4312 NP_057336 16 5631 NP_061181 16 5631 NP_683692 16 5631 NP_001184216 16 5631 XP_005248208 16 5631 XP_005248207 16 5631 XP_006714021 16 5631 XP_006712120 16 5631 XP_005264512 16 5631 XP_005264511 16 5631 XP_006712119 16 5631 XP_005264510 16 5631 XP_006712118 16 5631 XP_005264509 16 5631 XP_005264508 16 5631 XP_006712117 16 5631 XP_005264507 16 5631 XP_005264506 16 5631 NP_001013372 16 5631 NP_001005239 16 5631 NP_001439 16 7355 NP_060037 16 7355 NP_001121902 16 7355 NP_859075 16 7355 NP_001121901 16 7355 NP_055335 16 7355 NP_001099008 16 7355 NP_115818 16 7355 NP_001005408 16 7355 NP_064544 16 7355 NP_001241878 16 7355 XP_006721482 16 7355 XP_005256470 16 7355 XP_006719432 16 7355 XP_006719431 16 7355 XP_006714340 16 7355 XP_006714339 16 7355 XP_006714338 16 7355 NP_001001392 15 9605 NP_060876 15 9605 NP_003363 15 9605 NP_699188 15 9605 XP_005256545 15 9605 XP_005270979 15 9605 NP_056972 15 9605>NP_001268421 Length = 1230 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRMVTGNGA 9 KRMVTGNG+ Sbjct: 171 KRMVTGNGS 179>NP_000170 Length = 1360 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRMVTGNGA 9 KRMVTGNG+ Sbjct: 301 KRMVTGNGS 309>XP_005264328 Length = 1261 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KRMVTGNGA 9 KRMVTGNG+ Sbjct: 202 KRMVTGNGS 210>NP_001268422 Length = 1058 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MVTGNGA 9 MVTGNG+ Sbjct: 1 MVTGNGS 7>NP_001268423 Length = 1058 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MVTGNGA 9 MVTGNG+ Sbjct: 1 MVTGNGS 7>NP_002283 Length = 1798 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR+VTG G Sbjct: 494 KRLVTGRG 501>XP_005265184 Length = 1798 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR+VTG G Sbjct: 494 KRLVTGRG 501>NP_001276065 Length = 1521 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 674 KRIVTGN 680>NP_004778 Length = 1529 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 682 KRIVTGN 688>NP_001276064 Length = 1525 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 678 KRIVTGN 684>NP_937870 Length = 799 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 KR TGNG Sbjct: 595 KRSATGNG 602>NP_937872 Length = 1447 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 KR TGNG Sbjct: 1243 KRSATGNG 1250>XP_005248271 Length = 1404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 557 KRIVTGN 563>XP_006714049 Length = 1509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 686 KRIVTGN 692>XP_005248268 Length = 1533 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRMVTGN 7 KR+VTGN Sbjct: 686 KRIVTGN 692>XP_006713970 Length = 646 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 KR TGNG Sbjct: 442 KRSATGNG 449>XP_006713968 Length = 1447 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 KR TGNG Sbjct: 1243 KRSATGNG 1250>NP_002917 Length = 1376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 KR TGNG Sbjct: 1243 KRSATGNG 1250>NP_776253 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 RM+TGN A Sbjct: 174 RMITGNMA 181>NP_003646 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 K VTGNG Sbjct: 238 KEAVTGNG 245>NP_001269836 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRMVTGNGA 9 KR+V G GA Sbjct: 387 KRLVPGGGA 395>NP_001269837 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRMVTGNGA 9 KR+V G GA Sbjct: 355 KRLVPGGGA 363>NP_001269838 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRMVTGNGA 9 KR+V G GA Sbjct: 333 KRLVPGGGA 341>NP_006576 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRMVTGNGA 9 KR+V G GA Sbjct: 406 KRLVPGGGA 414>XP_005245126 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 RM+TGN A Sbjct: 174 RMITGNMA 181>NP_001128206 Length = 598 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 +RM +GNG Sbjct: 22 RRMASGNG 29>NP_039224 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 VTGNGA Sbjct: 37 VTGNGA 42>NP_057336 Length = 4857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>NP_061181 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRMVTGNGA 9 KR+ T NGA Sbjct: 279 KRIATENGA 287>NP_683692 Length = 3051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 +RMVTG G Sbjct: 1752 ERMVTGAG 1759>NP_001184216 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 +TGNGA Sbjct: 54 ITGNGA 59>XP_005248208 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 +RMVTG G Sbjct: 1752 ERMVTGAG 1759>XP_005248207 Length = 3098 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 +RMVTG G Sbjct: 1752 ERMVTGAG 1759>XP_006714021 Length = 3112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 +RMVTG G Sbjct: 1752 ERMVTGAG 1759>XP_006712120 Length = 4812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264512 Length = 4840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264511 Length = 4847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_006712119 Length = 4851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264510 Length = 4861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_006712118 Length = 4864 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264509 Length = 4870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264508 Length = 4875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_006712117 Length = 4878 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264507 Length = 4880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>XP_005264506 Length = 4884 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MVTGNGA 9 MVTG GA Sbjct: 1 MVTGGGA 7>NP_001013372 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 +TGNGA Sbjct: 54 ITGNGA 59>NP_001005239 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 +TGNGA Sbjct: 54 ITGNGA 59>NP_001439 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRMVTGNG 8 +RM GNG Sbjct: 411 ERMAAGNG 418>NP_060037 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 R VTG+GA Sbjct: 12 REVTGSGA 19>NP_001121902 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 475 MLTGNG 480>NP_859075 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RMVTGNGA 9 RMV G GA Sbjct: 198 RMVEGRGA 205>NP_001121901 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 475 MLTGNG 480>NP_055335 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR++TG G Sbjct: 75 KRLITGLG 82>NP_001099008 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR++TG G Sbjct: 75 KRLITGLG 82>NP_115818 Length = 1562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 608 MMTGNG 613>NP_001005408 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 608 MMTGNG 613>NP_064544 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 475 MLTGNG 480>NP_001241878 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 45 MLTGNG 50>XP_006721482 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR++TG G Sbjct: 75 KRLITGLG 82>XP_005256470 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRMVTGNG 8 KR++TG G Sbjct: 75 KRLITGLG 82>XP_006719432 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RMVTGNGA 9 RMV G GA Sbjct: 198 RMVEGRGA 205>XP_006719431 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RMVTGNGA 9 RMV G GA Sbjct: 198 RMVEGRGA 205>XP_006714340 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 475 MLTGNG 480>XP_006714339 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 242 MLTGNG 247>XP_006714338 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MVTGNG 8 M+TGNG Sbjct: 445 MLTGNG 450>NP_001001392 Length = 139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 + V+GNGA Sbjct: 116 QQVSGNGA 123>NP_060876 Length = 5412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RMVTGN 7 R+VTGN Sbjct: 515 RLVTGN 520>NP_003363 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 MVTGNG 8 M TGNG Sbjct: 13 MATGNG 18>NP_699188 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 +TGNGA Sbjct: 170 LTGNGA 175>XP_005256545 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTGNGA 9 +TGNGA Sbjct: 146 LTGNGA 151>XP_005270979 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 R+V+G GA Sbjct: 684 RLVSGGGA 691>NP_056972 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RMVTGNGA 9 R+V+G GA Sbjct: 684 RLVSGGGA 691Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.128 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 699,271 Number of extensions: 2009 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |