Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 665 NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_003048 17 2528 NP_694857 17 2528 XP_006726853 17 2528 XP_006723596 17 2528 XP_005267162 17 2528 XP_005267161 17 2528 XP_006715615 17 2528 XP_005267160 17 2528 XP_005267159 17 2528 XP_006710111 17 2528 NP_079366 17 3301 XP_005257601 17 3301 XP_005257599 17 3301 XP_005257600 17 3301 NP_001027462 17 4312 NP_116025 17 4312 NP_001005290 17 4312 XP_006711048 17 4312 XP_005271340 17 4312 XP_006711047 17 4312 XP_006711046 17 4312 XP_006711045 17 4312 XP_005271339 17 4312 NP_056507 17 4312 NP_060959 16 5631 XP_005245393 16 5631 XP_006711515 16 5631 XP_006711514 16 5631 XP_006711513 16 5631 NP_001119516 16 7355 NP_942012 16 7355 NP_942008 16 7355 NP_942007 16 7355 NP_942009 16 7355 NP_942011 16 7355 NP_942010 16 7355 NP_115689 16 7355 NP_001269212 16 7355 NP_542179 16 7355 NP_006582 16 7355 NP_001075042 16 7355 XP_006724869 16 7355 XP_006724868 16 7355 XP_005274706 16 7355 XP_005274705 16 7355 XP_006724867 16 7355 XP_005273773 16 7355 XP_006713056 16 7355 XP_005264949 16 7355 XP_006712357 16 7355 XP_006712356 16 7355 XP_006712355 16 7355 XP_006710345 16 7355 XP_006710344 16 7355 XP_006710343 16 7355 XP_006710342 16 7355 NP_006305 16 7355 NP_001035522 16 7355 NP_001010893 16 7355 NP_001230913 15 9605 NP_068810 15 9605 NP_001138610 15 9605 NP_001230914 15 9605 NP_001032903 15 9605 NP_001009 15 9605>NP_001243398 Length = 1781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KRKR FVLK Sbjct: 830 KRKRPFVLK 838>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KRKR FVLK Sbjct: 1122 KRKRPFVLK 1130>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KRKR FVLK Sbjct: 939 KRKRPFVLK 947>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KRKR FVLK Sbjct: 1122 KRKRPFVLK 1130>NP_003048 Length = 554 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 344 RKRTFIL 350>NP_694857 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_006726853 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KR+RTFV K Sbjct: 223 KRQRTFVEK 231>XP_006723596 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KR+RTFV K Sbjct: 223 KRQRTFVEK 231>XP_005267162 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 152 RKRTFIL 158>XP_005267161 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 152 RKRTFIL 158>XP_006715615 Length = 483 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_005267160 Length = 573 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_005267159 Length = 610 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RKRTFVL 8 RKRTF+L Sbjct: 344 RKRTFIL 350>XP_006710111 Length = 566 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KRKRTFVLK 9 KR+RTFV K Sbjct: 82 KRQRTFVEK 90>NP_079366 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRKRTFV 7 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257601 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRKRTFV 7 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257599 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRKRTFV 7 KRK+TFV Sbjct: 811 KRKKTFV 817>XP_005257600 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KRKRTFV 7 KRK+TFV Sbjct: 811 KRKKTFV 817>NP_001027462 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>NP_116025 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>NP_001005290 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_006711048 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_005271340 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_006711047 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_006711046 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_006711045 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>XP_005271339 Length = 363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+ TFVLK Sbjct: 113 RRETFVLK 120>NP_056507 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 KRKRTF Sbjct: 788 KRKRTF 793>NP_060959 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 2350 RERNFVLK 2357>XP_005245393 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 2350 RERNFVLK 2357>XP_006711515 Length = 2904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 2290 RERNFVLK 2297>XP_006711514 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 2350 RERNFVLK 2357>XP_006711513 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 2350 RERNFVLK 2357>NP_001119516 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942012 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942008 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942007 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942009 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942011 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_942010 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KRKRTFVL 8 KRK++F+L Sbjct: 83 KRKKSFLL 90>NP_115689 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RTFVLK 9 RTFVLK Sbjct: 527 RTFVLK 532>NP_001269212 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>NP_542179 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>NP_006582 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRKRTFVLK 9 KRKR VLK Sbjct: 380 KRKRKRVLK 388>NP_001075042 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>XP_006724869 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>XP_006724868 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 5 RKRWFVLR 12>XP_005274706 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 5 RKRWFVLR 12>XP_005274705 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>XP_006724867 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR FVL+ Sbjct: 27 RKRWFVLR 34>XP_005273773 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KRKRTFVLK 9 KRKR VLK Sbjct: 380 KRKRKRVLK 388>XP_006713056 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRKRTFVLK 9 KRKR +LK Sbjct: 264 KRKRKAILK 272>XP_005264949 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRKRTFVLK 9 KRKR +LK Sbjct: 319 KRKRKAILK 327>XP_006712357 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RKRTFVLK 9 +K+TFVL+ Sbjct: 183 KKKTFVLQ 190>XP_006712356 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RKRTFVLK 9 +K+TFVL+ Sbjct: 182 KKKTFVLQ 189>XP_006712355 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RKRTFVLK 9 +K+TFVL+ Sbjct: 183 KKKTFVLQ 190>XP_006710345 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 160 RRRWFVLK 167>XP_006710344 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 425 RRRWFVLK 432>XP_006710343 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 459 RRRWFVLK 466>XP_006710342 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 466 RRRWFVLK 473>NP_006305 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 R+R FVLK Sbjct: 418 RRRWFVLK 425>NP_001035522 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KRKRTFVLK 9 KRKR +LK Sbjct: 236 KRKRKAILK 244>NP_001010893 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRKRTFVL 8 KRKR F++ Sbjct: 431 KRKRNFLI 438>NP_001230913 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 KRKRT+ Sbjct: 301 KRKRTY 306>NP_068810 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001138610 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 KRKRT+ Sbjct: 298 KRKRTY 303>NP_001230914 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001032903 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RKRTFVLK 9 RKR F+L+ Sbjct: 61 RKRWFILR 68>NP_001009 Length = 145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KRKRTF 6 K+KRTF Sbjct: 7 KKKRTF 12Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.143 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 484,112 Number of extensions: 925 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |