Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 299 XP_006716142 20 299 XP_005250088 20 299 XP_006716141 20 299 XP_006716140 20 299 XP_005250084 20 299 XP_005250083 20 299 XP_005250082 20 299 NP_001265488 17 2528 XP_006715693 17 2528 XP_006715692 17 2528 XP_005266998 17 3301 NP_689908 17 4312 XP_005262452 17 4312 NP_001099007 16 5631 XP_006712793 16 5631 NP_997244 16 7355 NP_003092 16 7355 NP_001239441 16 7355 NP_001171992 16 7355 NP_009062 16 7355 NP_001239440 16 7355 NP_075048 16 7355 XP_005262528 16 7355 XP_005262527 16 7355 XP_005262526 16 7355 XP_006710345 16 7355 XP_006710344 16 7355 XP_006710343 16 7355 XP_006710342 16 7355 NP_006305 16 7355 NP_665739 15 9605 NP_997054 15 9605 NP_001181866 15 9605 NP_055915 15 9605 NP_001181867 15 9605 NP_005567 15 9605 NP_000410 15 9605 NP_055392 15 9605 NP_689777 15 9605 NP_060360 15 9605 NP_002603 15 9605 NP_001005850 15 9605 NP_055077 15 9605 XP_005261530 15 9605 XP_006724279 15 9605 XP_006724278 15 9605 XP_006724277 15 9605 XP_006724276 15 9605 XP_006724275 15 9605 XP_005261529 15 9605 XP_006724274 15 9605 XP_006724273 15 9605 XP_005261528 15 9605 XP_005261527 15 9605 XP_005259440 15 9605 XP_005259439 15 9605 XP_006722935 15 9605 XP_005250858 15 9605 XP_005250857 15 9605 XP_006711300 15 9605 XP_005245063 15 9605 XP_005245062 15 9605 XP_005245061 15 9605 XP_005245060 15 9605 XP_005245057 15 9605 XP_005245058 15 9605 XP_005245056 15 9605 NP_067092 15 9605>NP_733751 Length = 4911 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4720 KRFVLRPHT 4728>XP_006716142 Length = 4927 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4736 KRFVLRPHT 4744>XP_005250088 Length = 4928 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4737 KRFVLRPHT 4745>XP_006716141 Length = 4959 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4768 KRFVLRPHT 4776>XP_006716140 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4791 KRFVLRPHT 4799>XP_005250084 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4791 KRFVLRPHT 4799>XP_005250083 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4791 KRFVLRPHT 4799>XP_005250082 Length = 4983 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 KRFVLR HT Sbjct: 4792 KRFVLRPHT 4800>NP_001265488 Length = 1004 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRFVLRSH 8 KRFV +SH Sbjct: 408 KRFVYKSH 415>XP_006715693 Length = 1004 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRFVLRSH 8 KRFV +SH Sbjct: 408 KRFVYKSH 415>XP_006715692 Length = 1004 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KRFVLRSH 8 KRFV +SH Sbjct: 408 KRFVYKSH 415>XP_005266998 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 +R VLR+HT Sbjct: 653 ERHVLRAHT 661>NP_689908 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF RSH Sbjct: 386 KRFTRRSH 393>XP_005262452 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF RSH Sbjct: 145 KRFTRRSH 152>NP_001099007 Length = 1687 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RFVLRSH 8 RF+LR+H Sbjct: 1577 RFLLRTH 1583>XP_006712793 Length = 1887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RFVLRSH 8 RF+LR+H Sbjct: 1777 RFLLRTH 1783>NP_997244 Length = 3169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRFVLRSH 8 +RFV+R H Sbjct: 687 QRFVIRIH 694>NP_003092 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RFVLRSHT 9 RFV+++H+ Sbjct: 262 RFVMKAHS 269>NP_001239441 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RFVLRSHT 9 RFV+++H+ Sbjct: 197 RFVMKAHS 204>NP_001171992 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF+ SH Sbjct: 361 KRFIQNSH 368>NP_009062 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF+ SH Sbjct: 456 KRFIQNSH 463>NP_001239440 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RFVLRSHT 9 RFV+++H+ Sbjct: 204 RFVMKAHS 211>NP_075048 Length = 1088 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RFVLRSHT 9 +F+L++HT Sbjct: 636 KFMLKNHT 643>XP_005262528 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF+ SH Sbjct: 249 KRFIQNSH 256>XP_005262527 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF+ SH Sbjct: 288 KRFIQNSH 295>XP_005262526 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF+ SH Sbjct: 456 KRFIQNSH 463>XP_006710345 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVLRSHT 9 FVL+ HT Sbjct: 164 FVLKGHT 170>XP_006710344 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVLRSHT 9 FVL+ HT Sbjct: 429 FVLKGHT 435>XP_006710343 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVLRSHT 9 FVL+ HT Sbjct: 463 FVLKGHT 469>XP_006710342 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVLRSHT 9 FVL+ HT Sbjct: 470 FVLKGHT 476>NP_006305 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FVLRSHT 9 FVL+ HT Sbjct: 422 FVLKGHT 428>NP_665739 Length = 1315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 979 RFMLRHH 985>NP_997054 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1021 RFMLRHH 1027>NP_001181866 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1065 RFMLRHH 1071>NP_055915 Length = 1410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1074 RFMLRHH 1080>NP_001181867 Length = 1348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1012 RFMLRHH 1018>NP_005567 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRFVLRSHT 9 KR+ SHT Sbjct: 493 KRYACTSHT 501>NP_000410 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RFVLRSH 8 +FVL+SH Sbjct: 952 QFVLQSH 958>NP_055392 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 470 KQFVERAHS 478>NP_689777 Length = 3997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FVLRSH 8 F++RSH Sbjct: 2822 FIMRSH 2827>NP_060360 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FVLRSH 8 F++RSH Sbjct: 2847 FIMRSH 2852>NP_002603 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RFVLRS 7 RFVLRS Sbjct: 5 RFVLRS 10>NP_001005850 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF RSH Sbjct: 369 KRFSNRSH 376>NP_055077 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KRFVLRS 7 +RF+LRS Sbjct: 377 QRFILRS 383>XP_005261530 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 65 KQFVERAHS 73>XP_006724279 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 83 KQFVERAHS 91>XP_006724278 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 507 KQFVERAHS 515>XP_006724277 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 507 KQFVERAHS 515>XP_006724276 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 470 KQFVERAHS 478>XP_006724275 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 507 KQFVERAHS 515>XP_005261529 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 507 KQFVERAHS 515>XP_006724274 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 470 KQFVERAHS 478>XP_006724273 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 470 KQFVERAHS 478>XP_005261528 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 470 KQFVERAHS 478>XP_005261527 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KRFVLRSHT 9 K+FV R+H+ Sbjct: 507 KQFVERAHS 515>XP_005259440 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF RSH Sbjct: 369 KRFSNRSH 376>XP_005259439 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 KRF RSH Sbjct: 369 KRFSNRSH 376>XP_006722935 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 K F+L SH Sbjct: 419 KSFILSSH 426>XP_005250858 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FVLRSH 8 F++RSH Sbjct: 2847 FIMRSH 2852>XP_005250857 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FVLRSH 8 F++RSH Sbjct: 2847 FIMRSH 2852>XP_006711300 Length = 1348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1012 RFMLRHH 1018>XP_005245063 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1021 RFMLRHH 1027>XP_005245062 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1021 RFMLRHH 1027>XP_005245061 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1021 RFMLRHH 1027>XP_005245060 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1065 RFMLRHH 1071>XP_005245057 Length = 1410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1074 RFMLRHH 1080>XP_005245058 Length = 1410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1074 RFMLRHH 1080>XP_005245056 Length = 1410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RFVLRSH 8 RF+LR H Sbjct: 1074 RFMLRHH 1080>NP_067092 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KRFVLRSH 8 K F+L SH Sbjct: 483 KSFILSSH 490Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.139 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 548,289 Number of extensions: 969 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |