Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005742                                                              20     299
NP_671714                                                              20     299
XP_006715890                                                           20     299
XP_005250160                                                           20     299
XP_005250159                                                           20     299
NP_009165                                                              17    4312
NP_001268356                                                           17    4312
NP_001268355                                                           17    4312
NP_001268354                                                           17    4312
NP_077324                                                              17    4312
NP_055816                                                              16    5631
NP_955383                                                              16    5631
NP_001135993                                                           16    5631
NP_001135991                                                           16    5631
NP_071357                                                              16    5631
NP_942144                                                              16    5631
NP_001135992                                                           16    5631
NP_689707                                                              16    5631
NP_001137159                                                           16    5631
NP_057164                                                              16    5631
XP_006721603                                                           16    5631
XP_006711375                                                           16    5631
XP_005245202                                                           16    5631
XP_006711374                                                           16    5631
XP_006711373                                                           16    5631
XP_006711372                                                           16    5631
XP_006711371                                                           16    5631
NP_001184033                                                           16    7355
NP_005924                                                              16    7355
NP_003888                                                              16    7355
NP_659404                                                              16    7355
NP_001269536                                                           16    7355
NP_001138923                                                           16    7355
NP_054865                                                              16    7355
NP_055495                                                              16    7355
NP_115852                                                              16    7355
NP_115853                                                              16    7355
XP_006724792                                                           16    7355
XP_006722261                                                           16    7355
XP_005258130                                                           16    7355
XP_006718995                                                           16    7355
XP_005274425                                                           16    7355
XP_006718994                                                           16    7355
XP_006718993                                                           16    7355
XP_005274424                                                           16    7355
XP_005274423                                                           16    7355
XP_005250619                                                           16    7355
NP_203753                                                              16    7355
NP_001153844                                                           15    9605
NP_113654                                                              15    9605
NP_001153889                                                           15    9605
NP_110403                                                              15    9605
NP_877439                                                              15    9605
NP_001153891                                                           15    9605
NP_066267                                                              15    9605
NP_031373                                                              15    9605
NP_001239056                                                           15    9605
NP_001243595                                                           15    9605
NP_001243596                                                           15    9605
NP_001243597                                                           15    9605
XP_006720510                                                           15    9605
XP_005254321                                                           15    9605
XP_006717852                                                           15    9605
XP_006717851                                                           15    9605
XP_006717850                                                           15    9605
XP_006717849                                                           15    9605
XP_006717848                                                           15    9605
XP_006717847                                                           15    9605
XP_006717846                                                           15    9605
XP_006717845                                                           15    9605
XP_006716727                                                           15    9605
XP_005251134                                                           15    9605
XP_006713995                                                           15    9605
XP_006713993                                                           15    9605
NP_003695                                                              15    9605
>NP_005742
          Length = 3907

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    KRESRKILY 9
            KRESR+ILY
Sbjct: 3453 KRESRRILY 3461
>NP_671714
          Length = 3899

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    KRESRKILY 9
            KRESR+ILY
Sbjct: 3445 KRESRRILY 3453
>XP_006715890
          Length = 3860

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    KRESRKILY 9
            KRESR+ILY
Sbjct: 3406 KRESRRILY 3414
>XP_005250160
          Length = 3939

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    KRESRKILY 9
            KRESR+ILY
Sbjct: 3485 KRESRRILY 3493
>XP_005250159
          Length = 3952

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    KRESRKILY 9
            KRESR+ILY
Sbjct: 3498 KRESRRILY 3506
>NP_009165
          Length = 186

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  KILY
Sbjct: 50 KRERVKILY 58
>NP_001268356
          Length = 176

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  KILY
Sbjct: 50 KRERVKILY 58
>NP_001268355
          Length = 154

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  KILY
Sbjct: 50 KRERVKILY 58
>NP_001268354
          Length = 158

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  KILY
Sbjct: 50 KRERVKILY 58
>NP_077324
          Length = 176

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  KILY
Sbjct: 50 KRERVKILY 58
>NP_055816
          Length = 3664

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    KRESRKI 7
            KRES+KI
Sbjct: 1046 KRESKKI 1052
>NP_955383
          Length = 639

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 305 ERDSMKVLY 313
>NP_001135993
          Length = 611

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KRESRKIL 8
           KRES KI+
Sbjct: 304 KRESEKII 311
>NP_001135991
          Length = 611

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KRESRKIL 8
           KRES KI+
Sbjct: 304 KRESEKII 311
>NP_071357
          Length = 611

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KRESRKIL 8
           KRES KI+
Sbjct: 304 KRESEKII 311
>NP_942144
          Length = 611

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KRESRKIL 8
           KRES KI+
Sbjct: 304 KRESEKII 311
>NP_001135992
          Length = 611

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   KRESRKIL 8
           KRES KI+
Sbjct: 304 KRESEKII 311
>NP_689707
          Length = 706

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE ++IL+
Sbjct: 585 KREKKRILF 593
>NP_001137159
          Length = 681

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE ++IL+
Sbjct: 560 KREKKRILF 568
>NP_057164
          Length = 298

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   KRESRKIL 8
           KRE++KIL
Sbjct: 219 KRENQKIL 226
>XP_006721603
          Length = 289

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   KRESRKIL 8
           KRE++KIL
Sbjct: 210 KRENQKIL 217
>XP_006711375
          Length = 361

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  KRESRKILY 9
          +R+S K+LY
Sbjct: 27 ERDSMKVLY 35
>XP_005245202
          Length = 512

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 178 ERDSMKVLY 186
>XP_006711374
          Length = 580

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 246 ERDSMKVLY 254
>XP_006711373
          Length = 620

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 286 ERDSMKVLY 294
>XP_006711372
          Length = 623

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 289 ERDSMKVLY 297
>XP_006711371
          Length = 638

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           +R+S K+LY
Sbjct: 304 ERDSMKVLY 312
>NP_001184033
          Length = 3972

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRESRK 6
           KRESRK
Sbjct: 885 KRESRK 890
>NP_005924
          Length = 3969

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRESRK 6
           KRESRK
Sbjct: 885 KRESRK 890
>NP_003888
          Length = 156

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1  KRESRKILY 9
          ++ SR++LY
Sbjct: 59 RKRSRRVLY 67
>NP_659404
          Length = 547

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRESRK 6
           KRESRK
Sbjct: 395 KRESRK 400
>NP_001269536
          Length = 535

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRESRK 6
           KRESRK
Sbjct: 383 KRESRK 388
>NP_001138923
          Length = 870

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   KRESRKI 7
           +RESRK+
Sbjct: 112 RRESRKV 118
>NP_054865
          Length = 243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RESRKIL 8
           RESRK++
Sbjct: 203 RESRKVM 209
>NP_055495
          Length = 2235

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    KRESRKIL 8
            KR+SRK L
Sbjct: 2165 KRDSRKAL 2172
>NP_115852
          Length = 243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RESRKIL 8
           RESRK++
Sbjct: 203 RESRKVM 209
>NP_115853
          Length = 243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RESRKIL 8
           RESRK++
Sbjct: 203 RESRKVM 209
>XP_006724792
          Length = 411

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   KRESRK 6
           KRESRK
Sbjct: 259 KRESRK 264
>XP_006722261
          Length = 2092

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    KRESRKIL 8
            KR+SRK L
Sbjct: 2022 KRDSRKAL 2029
>XP_005258130
          Length = 2234

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    KRESRKIL 8
            KR+SRK L
Sbjct: 2164 KRDSRKAL 2171
>XP_006718995
          Length = 2382

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 747 RREAQEVLY 755
>XP_005274425
          Length = 2566

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 980 RREAQEVLY 988
>XP_006718994
          Length = 2567

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 980 RREAQEVLY 988
>XP_006718993
          Length = 2602

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 967 RREAQEVLY 975
>XP_005274424
          Length = 2614

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 980 RREAQEVLY 988
>XP_005274423
          Length = 2615

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 980 RREAQEVLY 988
>XP_005250619
          Length = 243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RESRKIL 8
           RESRK++
Sbjct: 203 RESRKVM 209
>NP_203753
          Length = 2601

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 9/9 (100%)

Query: 1   KRESRKILY 9
           +RE++++LY
Sbjct: 967 RREAQEVLY 975
>NP_001153844
          Length = 1148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  RESRKILY 9
          R+S+++LY
Sbjct: 47 RDSQRVLY 54
>NP_113654
          Length = 1246

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   RESRKILY 9
           R+S+++LY
Sbjct: 145 RDSQRVLY 152
>NP_001153889
          Length = 428

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  ++LY
Sbjct: 42 KRELNQVLY 50
>NP_110403
          Length = 429

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  ++LY
Sbjct: 42 KRELNQVLY 50
>NP_877439
          Length = 852

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   KRESRKILY 9
           +R +RK LY
Sbjct: 707 ERNTRKFLY 715
>NP_001153891
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  KRESRKILY 9
          KRE  ++LY
Sbjct: 42 KRELNQVLY 50
>NP_066267
          Length = 4377

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2922 KSPSKKVLY 2930
>NP_031373
          Length = 1137

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE+ ++LY
Sbjct: 390 KRETLELLY 398
>NP_001239056
          Length = 1062

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE+ ++LY
Sbjct: 315 KRETLELLY 323
>NP_001243595
          Length = 1265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1096 KREERKV 1102
>NP_001243596
          Length = 1246

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1118 KREERKV 1124
>NP_001243597
          Length = 1211

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1096 KREERKV 1102
>XP_006720510
          Length = 1062

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE+ ++LY
Sbjct: 315 KRETLELLY 323
>XP_005254321
          Length = 1062

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   KRESRKILY 9
           KRE+ ++LY
Sbjct: 315 KRETLELLY 323
>XP_006717852
          Length = 3508

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2053 KSPSKKVLY 2061
>XP_006717851
          Length = 3513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2058 KSPSKKVLY 2066
>XP_006717850
          Length = 4364

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2909 KSPSKKVLY 2917
>XP_006717849
          Length = 4383

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2928 KSPSKKVLY 2936
>XP_006717848
          Length = 4392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2937 KSPSKKVLY 2945
>XP_006717847
          Length = 4395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2940 KSPSKKVLY 2948
>XP_006717846
          Length = 4396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2941 KSPSKKVLY 2949
>XP_006717845
          Length = 4397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    KRESRKILY 9
            K  S+K+LY
Sbjct: 2942 KSPSKKVLY 2950
>XP_006716727
          Length = 1139

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  RESRKILY 9
          R+S+++LY
Sbjct: 47 RDSQRVLY 54
>XP_005251134
          Length = 1148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2  RESRKILY 9
          R+S+++LY
Sbjct: 47 RDSQRVLY 54
>XP_006713995
          Length = 1448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1320 KREERKV 1326
>XP_006713993
          Length = 1424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1296 KREERKV 1302
>NP_003695
          Length = 1224

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    KRESRKI 7
            KRE RK+
Sbjct: 1096 KREERKV 1102
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.321    0.137    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 498,637
Number of extensions: 1161
Number of successful extensions: 75
Number of sequences better than 10000.0: 75
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 75
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

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