Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002040 21 229 NP_002743 17 2528 NP_001128516 17 2528 NP_620709 17 2528 NP_620707 17 2528 NP_620708 17 2528 XP_005265997 17 2528 XP_006714954 17 2528 XP_006718823 17 3301 NP_115810 17 4312 NP_001073982 16 5631 NP_065133 16 5631 XP_005269338 16 5631 XP_005269337 16 5631 NP_001136433 16 5631 NP_000327 16 7355 NP_002042 16 7355 NP_001002295 16 7355 NP_001271175 16 7355 NP_056371 16 7355 NP_001271176 16 7355 NP_001271174 16 7355 XP_006722922 16 7355 XP_005255524 16 7355 XP_005267576 16 7355 XP_006720175 16 7355 XP_006720174 16 7355 XP_005267573 16 7355 XP_006720173 16 7355 XP_006720172 16 7355 XP_005267571 16 7355 XP_005252500 16 7355 XP_005252499 16 7355 NP_001005276 16 7355 NP_004501 15 9605 NP_004500 15 9605 NP_536349 15 9605 NP_060316 15 9605 NP_055951 15 9605 NP_597725 15 9605 NP_001171944 15 9605 NP_872307 15 9605 NP_001092805 15 9605 NP_055574 15 9605 NP_001273282 15 9605 NP_001273281 15 9605 NP_689602 15 9605 NP_001107604 15 9605 NP_062547 15 9605 NP_064575 15 9605 XP_006716479 15 9605 XP_005249691 15 9605 XP_005249690 15 9605 XP_005265032 15 9605 XP_005265031 15 9605 XP_005265030 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_005246584 15 9605 XP_006712552 15 9605 XP_006712550 15 9605 XP_006712549 15 9605 XP_005246582 15 9605 XP_006712354 15 9605 XP_006712353 15 9605 XP_006712352 15 9605 XP_006710841 15 9605 XP_005276104 15 9605>NP_002040 Length = 413 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KRARTQCTN 9 KRA TQCTN Sbjct: 252 KRAGTQCTN 260>NP_002743 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>NP_001128516 Length = 242 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>NP_620709 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>NP_620707 Length = 382 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>NP_620708 Length = 382 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>XP_005265997 Length = 398 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 147 ARTACTN 153>XP_006714954 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CTN Sbjct: 173 ARTACTN 179>XP_006718823 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RART C N Sbjct: 154 RARTHCGN 161>NP_115810 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRARTQCT 8 K +RTQC+ Sbjct: 29 KNSRTQCS 36>NP_001073982 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRARTQCT 8 + AR+QCT Sbjct: 475 RAARSQCT 482>NP_065133 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RART TN Sbjct: 316 RARTSATN 323>XP_005269338 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRARTQCT 8 + AR+QCT Sbjct: 475 RAARSQCT 482>XP_005269337 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KRARTQCT 8 + AR+QCT Sbjct: 475 RAARSQCT 482>NP_001136433 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RART TN Sbjct: 316 RARTSATN 323>NP_000327 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RTQCT 8 RTQCT Sbjct: 200 RTQCT 204>NP_002042 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 +RA T C N Sbjct: 311 RRAGTSCAN 319>NP_001002295 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 +RA T C N Sbjct: 312 RRAGTSCAN 320>NP_001271175 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>NP_056371 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>NP_001271176 Length = 1803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>NP_001271174 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_006722922 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RARTQC 7 RART+C Sbjct: 474 RARTRC 479>XP_005255524 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 RTQCT 8 RTQCT Sbjct: 245 RTQCT 249>XP_005267576 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_006720175 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_006720174 Length = 1803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_005267573 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_006720173 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_006720172 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_005267571 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 AR+QC N Sbjct: 1142 ARSQCRN 1148>XP_005252500 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 +RA T C N Sbjct: 312 RRAGTSCAN 320>XP_005252499 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 +RA T C N Sbjct: 312 RRAGTSCAN 320>NP_001005276 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RARTQCT 8 R R+QCT Sbjct: 260 RPRSQCT 266>NP_004501 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 336 QKARTEC 342>NP_004500 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 336 QKARTEC 342>NP_536349 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 336 QKARTEC 342>NP_060316 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KRARTQC 7 KRA T+C Sbjct: 151 KRALTEC 157>NP_055951 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RAR CT+ Sbjct: 2131 RARNPCTD 2138>NP_597725 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 + RT+C N Sbjct: 326 KGRTECRN 333>NP_001171944 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 342 QKARTEC 348>NP_872307 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CT+ Sbjct: 303 ARTACTS 309>NP_001092805 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 + ART C N Sbjct: 150 QHARTHCGN 158>NP_055574 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 + ART C N Sbjct: 150 QHARTHCGN 158>NP_001273282 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RARTQCT 8 RAR QC+ Sbjct: 281 RARIQCS 287>NP_001273281 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RARTQCT 8 RAR QC+ Sbjct: 322 RARIQCS 328>NP_689602 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KRARTQC 7 K +RTQC Sbjct: 120 KGSRTQC 126>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 478 RQSRTTCVN 486>NP_062547 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARTQC 7 ARTQC Sbjct: 289 ARTQC 293>NP_064575 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RARTQCT 8 RAR QC+ Sbjct: 342 RARIQCS 348>XP_006716479 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KRARTQCTN 9 + ART C N Sbjct: 150 QHARTHCGN 158>XP_005249691 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 + RT+C N Sbjct: 108 KGRTECRN 115>XP_005249690 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 + RT+C N Sbjct: 326 KGRTECRN 333>XP_005265032 Length = 2545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RAR CT+ Sbjct: 2081 RARNPCTD 2088>XP_005265031 Length = 2569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RAR CT+ Sbjct: 2131 RARNPCTD 2138>XP_005265030 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RARTQCTN 9 RAR CT+ Sbjct: 2131 RARNPCTD 2138>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 450 RQSRTTCVN 458>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 507 RQSRTTCVN 515>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 478 RQSRTTCVN 486>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 507 RQSRTTCVN 515>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 507 RQSRTTCVN 515>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KRARTQCTN 9 +++RT C N Sbjct: 507 RQSRTTCVN 515>XP_005246584 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 133 QKARTEC 139>XP_006712552 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 342 QKARTEC 348>XP_006712550 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 342 QKARTEC 348>XP_006712549 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 336 QKARTEC 342>XP_005246582 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KRARTQC 7 ++ART+C Sbjct: 342 QKARTEC 348>XP_006712354 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CT+ Sbjct: 303 ARTACTS 309>XP_006712353 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CT+ Sbjct: 303 ARTACTS 309>XP_006712352 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARTQCTN 9 ART CT+ Sbjct: 303 ARTACTS 309>XP_006710841 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RARTQCT 8 RAR QC+ Sbjct: 281 RARIQCS 287>XP_005276104 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KRARTQC 7 +RAR QC Sbjct: 172 RRARHQC 178Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.117 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 504,488 Number of extensions: 597 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |